Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1896
         (766 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6DQ01 Cluster: N-acetylgalactosamine-4-sulfatase; n=2;...    33   7.8  
UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase...    33   7.8  

>UniRef50_A6DQ01 Cluster: N-acetylgalactosamine-4-sulfatase; n=2;
           Lentisphaera araneosa HTCC2155|Rep:
           N-acetylgalactosamine-4-sulfatase - Lentisphaera
           araneosa HTCC2155
          Length = 616

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 622 WGNDYFMGTTYIGSKNAKKEETCDD--SDPEEEIVKTGLIK 738
           WGNDYF  T Y+  +  K E  C D   D  ++ +KT + K
Sbjct: 154 WGNDYFNDTYYVNGEFVKFEGFCTDVWFDEAKKFMKTQISK 194


>UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase;
           n=5; Aphelenchus avenae|Rep: Putative trehalose
           6-phosphate synthase - Aphelenchus avenae (Mycophagous
           nematode worm)
          Length = 1303

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -2

Query: 486 GFFLHITIVFFLNDNFFVFTRVCMFVIYRG 397
           GFFLHI   F   DNFF   R+C F I RG
Sbjct: 534 GFFLHIP--FLPPDNFFTKYRLCAFPIMRG 561


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,580,551
Number of Sequences: 1657284
Number of extensions: 12595704
Number of successful extensions: 30377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30360
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)