Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1895
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    29   7.1  
BT029276-1|ABK30913.1|  251|Drosophila melanogaster IP09812p pro...    29   9.3  
AY089664-1|AAL90402.1|  251|Drosophila melanogaster RH30329p pro...    29   9.3  
AE014297-566|AAF54058.3|  251|Drosophila melanogaster CG33323-PA...    29   9.3  

>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
           protein.
          Length = 5146

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 671 LVNFTTIYVI-SFSSHLYNNLSSLIFLVINNQL 766
           ++NFTT+ +  SFS HLYN++  L  L+ +  +
Sbjct: 97  VLNFTTLLIEHSFSRHLYNSIEHLTVLLSSQNM 129


>BT029276-1|ABK30913.1|  251|Drosophila melanogaster IP09812p
           protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 533 YRRSWTSESPGAPQSRCLPL 474
           Y R+WT E P  P S+ LPL
Sbjct: 190 YARTWTPEDPRGPHSQPLPL 209


>AY089664-1|AAL90402.1|  251|Drosophila melanogaster RH30329p
           protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 533 YRRSWTSESPGAPQSRCLPL 474
           Y R+WT E P  P S+ LPL
Sbjct: 190 YARTWTPEDPRGPHSQPLPL 209


>AE014297-566|AAF54058.3|  251|Drosophila melanogaster CG33323-PA
           protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 533 YRRSWTSESPGAPQSRCLPL 474
           Y R+WT E P  P S+ LPL
Sbjct: 190 YARTWTPEDPRGPHSQPLPL 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,325,663
Number of Sequences: 53049
Number of extensions: 606982
Number of successful extensions: 1359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)