Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1890
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.3  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    21   3.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   3.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   6.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   6.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 130 PDSCS*CLIGSLCRSKIYKLFRKIIQLEDRFGKPIQLIHLFNIT 261
           PD       G +C   + K+   I+       KP + + LFNIT
Sbjct: 65  PDGLKLLSDGLMC---VEKVSTTIVPTTQEINKPFKRLELFNIT 105


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 179 ILLRHNEPIKHQEQESGRTTIRSNPSDA 96
           IL   +EP+ + +++S +   R  P D+
Sbjct: 22  ILSPSSEPLDNDKEQSAQVCYRGAPQDS 49


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 179 ILLRHNEPIKHQEQESGRTTIRSNPSDA 96
           IL   +EP+ + +++S +   R  P D+
Sbjct: 22  ILSPSSEPLDNDKEQSAQVCYRGAPQDS 49


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 70 QINKKWWKHA 99
          Q NK WWK+A
Sbjct: 19 QNNKGWWKNA 28


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 188 SLYILLRHNEPIKHQEQESGRTTIRS 111
           S+Y LLR   P  H     GR   RS
Sbjct: 68  SVYPLLRFENPETHHPIRHGRRQSRS 93


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 176 KYTSYSAKSFNWKTGLGNPFN*YTYLILHNYI 271
           KY++Y+  + N+     N +N     +  NYI
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 176 KYTSYSAKSFNWKTGLGNPFN*YTYLILHNYI 271
           KY++Y+  + N+     N +N     +  NYI
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 LGNPFN*YTYLILHNYISIF 280
           +GN  N  TY IL+++  IF
Sbjct: 376 IGNNENEGTYFILYDFNDIF 395


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 LGNPFN*YTYLILHNYISIF 280
           +GN  N  TY IL+++  IF
Sbjct: 376 IGNNENEGTYFILYDFNDIF 395


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,035
Number of Sequences: 438
Number of extensions: 1996
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)