Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1888
(794 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 48 5e-05
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 48 5e-05
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 48 5e-05
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 48 5e-05
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 48 5e-05
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 48 5e-05
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 48 5e-05
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 45 4e-04
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 33 1.2
BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein. 33 1.2
BC009074-1|AAH09074.1| 325|Homo sapiens chromosome 8 open readi... 33 1.2
AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegat... 33 1.2
AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegat... 33 1.2
AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegat... 33 1.2
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 33 1.2
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF151820-1|AAD34057.1| 325|Homo sapiens CGI-62 protein protein. 33 1.6
BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S. cerev... 31 3.6
AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S. cerev... 31 3.6
AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein. 31 3.6
AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair ... 31 3.6
AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding... 31 3.6
AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair ... 31 3.6
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 31 6.3
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 31 6.3
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 31 6.3
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 31 6.3
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 31 6.3
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 31 6.3
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 31 6.3
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 30 8.4
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 30 8.4
U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human N-ethylma... 30 8.4
BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein. 30 8.4
BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensit... 30 8.4
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 30 8.4
AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isofo... 30 8.4
AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein. 30 8.4
AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein. 30 8.4
AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensit... 30 8.4
AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor int... 30 8.4
AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensit... 30 8.4
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 266 LWGPPGCGKTTLAHIIA 282
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 518 TAL 526
+AL
Sbjct: 78 SAL 80
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 48
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 46 LWGPPGCGKTTLAHIIA 62
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 266 LWGPPGCGKTTLAHIIA 282
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 518 TAL 526
+AL
Sbjct: 78 SAL 80
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 266 LWGPPGCGKTTLAHIIA 282
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 518 TAL 526
+AL
Sbjct: 78 SAL 80
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 266 LWGPPGCGKTTLAHIIA 282
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 518 TAL 526
+AL
Sbjct: 78 SAL 80
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 48
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 46 LWGPPGCGKTTLAHIIA 62
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 47.6 bits (108), Expect = 5e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMIFVG 715
PL++++RP +L GQ ++ G D++LRS+LE N+IP++I G
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 249
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 247 LWGPPGCGKTTLAHIIA 263
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 3 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 62
Query: 518 TAL 526
+AL
Sbjct: 63 SAL 65
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 44.8 bits (101), Expect = 4e-04
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +2
Query: 587 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNM 703
PL++++RP +L GQ ++ G D++LRS+LE N+IP++
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSL 264
Score = 37.9 bits (84), Expect = 0.042
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
LWGPPGCGKT+LA++I+
Sbjct: 266 LWGPPGCGKTTLAHIIA 282
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 517
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 518 TAL 526
+AL
Sbjct: 78 SAL 80
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 341 SDCTKTVNCPICNRSFENTEIEEHVNKCL 427
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein.
Length = 230
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 474 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 379
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>BC009074-1|AAH09074.1| 325|Homo sapiens chromosome 8 open reading
frame 70 protein.
Length = 325
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNL 538
+ CP C R F + H+N C + SN + R +V K PP L
Sbjct: 120 IQCPYCQRRFNENAADRHINFCK-EQAARISNKGKFSADTKGKPTSRTQVYK----PPAL 174
Query: 539 KSSQSQKISTNENIKIP 589
K S S +++ + ++P
Sbjct: 175 KKSNSPGTASSGSSRLP 191
>AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 175
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 474 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 379
C PCL LD QEL ++ TC SI + + L
Sbjct: 2 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 33
>AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 410
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 474 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 379
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 230
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 474 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 379
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 341 SDCTKTVNCPICNRSFENTEIEEHVNKCL 427
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 341 SDCTKTVNCPICNRSFENTEIEEHVNKCL 427
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>AF151820-1|AAD34057.1| 325|Homo sapiens CGI-62 protein protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNL 538
+ CP C R F + H+N C + SN R +V K PP L
Sbjct: 120 IQCPYCQRRFNENAADRHINFCK-EQAARISNEGEFSTDTKGKPSSRTQVYK----PPAL 174
Query: 539 KSSQSQKISTNENIKIP 589
K S S +++ + ++P
Sbjct: 175 KKSNSPGTASSGSSRLP 191
>BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair
protein hRAD18p variant protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQRDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ13013 fis, clone NT2RP3000590, weakly similar to
UVS-2 PROTEIN. ).
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding
protein protein.
Length = 484
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair
protein hRAD18p protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLF----LNSCEKSNSKRQG-----QQLLSPNEKRKKVE 511
V+CP+C + + I +H++ CL S S KR+ LLS + +KK++
Sbjct: 202 VDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLK 261
Query: 512 KLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNK 691
+ K ++ ++ ++L PKS +IV Q R LE +K
Sbjct: 262 EHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIV---QEIENIEKTRMRLEASK 318
Query: 692 IPNMIFVGSTRLRKDVISKCHL*Y 763
+ + V + + I + H Y
Sbjct: 319 LNESVMVFTKDQTEKEIDEIHSKY 342
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 173 MYGPPGCGKTMLAKAVA 189
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
++GPPGCGKT LA ++
Sbjct: 204 MYGPPGCGKTMLAKAVA 220
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
L GPPGCGKT LA+ I+
Sbjct: 197 LHGPPGCGKTLLAHAIA 213
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
L GPPGCGKT LA+ I+
Sbjct: 303 LHGPPGCGKTLLAHAIA 319
>U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human
N-ethylmaleimide-sensitive factor mRNA, partial cds. ).
Length = 751
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVI 755
L+GPPGCGKT LA I
Sbjct: 265 LYGPPGCGKTLLARQI 280
>BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein.
Length = 553
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 466
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 337 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 372
>BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVI 755
L+GPPGCGKT LA I
Sbjct: 258 LYGPPGCGKTLLARQI 273
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVIS 758
L GPPGCGKT LA+ I+
Sbjct: 106 LHGPPGCGKTLLAHAIA 122
>AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isoform
protein.
Length = 381
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 278 NIRLGLKVSSPGS*N*KDKNMSDCTKTVNCPICNRSF-ENTEIEEHVNKC 424
N+ + L S+P + +M+ K C C RS+ + + +EEH +C
Sbjct: 24 NMAIDLTSSTPNGQHASPSHMTSMGKPHKCNYCGRSYKQRSSLEEHKERC 73
>AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein.
Length = 349
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 466
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 466
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 425 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 460
>AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVI 755
L+GPPGCGKT LA I
Sbjct: 258 LYGPPGCGKTLLARQI 273
>AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor
interacting protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 359 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 466
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 30.3 bits (65), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 708 LWGPPGCGKTSLANVI 755
L+GPPGCGKT LA I
Sbjct: 258 LYGPPGCGKTLLARQI 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,028,671
Number of Sequences: 237096
Number of extensions: 2197678
Number of successful extensions: 9485
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 9114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9478
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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