Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1885
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 262 2e-70
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 236 1e-62
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 236 1e-62
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 95 3e-20
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 92 3e-19
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 92 3e-19
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 91 5e-19
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 70 2e-12
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 61 6e-10
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 60 1e-09
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 52 3e-07
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.008
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 38 0.008
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 36 0.032
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 36 0.032
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 34 0.097
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 32 0.39
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 2.8
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 29 2.8
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 3.7
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 28 6.4
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 28 6.4
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 27 8.4
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 27 8.4
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 262 bits (641), Expect = 2e-70
Identities = 126/164 (76%), Positives = 140/164 (85%)
Frame = +1
Query: 142 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 321
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 322 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 501
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 502 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 194
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 236 bits (577), Expect = 1e-62
Identities = 113/164 (68%), Positives = 135/164 (82%)
Frame = +1
Query: 142 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 321
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 322 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 501
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 502 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPK
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPK 189
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 236 bits (577), Expect = 1e-62
Identities = 113/164 (68%), Positives = 135/164 (82%)
Frame = +1
Query: 142 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 321
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 322 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 501
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 502 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPK
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPK 210
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Frame = +1
Query: 160 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 330
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 331 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 510
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 511 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PK
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPK 223
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 92.3 bits (219), Expect = 3e-19
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = +1
Query: 199 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 378
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 379 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 558
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 559 EIKEVIELPVKHPELFDALGIAQPK 633
E++EV+ELP+ +PELF +GI PK
Sbjct: 153 ELREVVELPLINPELFKRVGITPPK 177
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 92.3 bits (219), Expect = 3e-19
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = +1
Query: 199 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 378
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 379 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 558
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 559 EIKEVIELPVKHPELFDALGIAQPK 633
E++EV+ELP+ +PELF +GI PK
Sbjct: 161 ELREVVELPLINPELFKRVGITPPK 185
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 91.5 bits (217), Expect = 5e-19
Identities = 44/101 (43%), Positives = 61/101 (60%)
Frame = +1
Query: 331 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 510
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 511 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
PD TY VGG QI++++EV+E P+ HPE + LGI PK
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPK 212
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +1
Query: 298 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 477
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 478 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPR 196
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 457 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PK
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPK 218
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/102 (31%), Positives = 53/102 (51%)
Frame = +1
Query: 328 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 507
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 508 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
P Y +GG DKQI+E+ E + LP+ H + F LGI PK
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPK 212
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 475 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPR 245
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 388 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 561
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 562 IKEVIELPVKHPELFDALGIAQP 630
++E+++ PV+HPE + G+ QP
Sbjct: 495 LQELVQYPVEHPEKYLKFGM-QP 516
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +1
Query: 475 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 388 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 561
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 562 IKEVIELPVKHPELFDALGIAQP 630
++E+++ PV+HPE + G+ QP
Sbjct: 494 LQELVQYPVEHPEKYLKFGM-QP 515
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +1
Query: 475 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 388 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 561
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 562 IKEVIELPVKHPELFDALGIAQP 630
++E+++ PV+HPE + G+ QP
Sbjct: 494 LQELVQYPVEHPEKYLKFGM-QP 515
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 424
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 424
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 523 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
++ VGGL I+ +KEV+ P+ +PE+F+ I PK
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 469 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 630
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPP 493
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 520 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
T E VGG+ +Q K +++VI P K+P+LF+++G+ K
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSK 763
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 520 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
T E VGG+ +Q K +++VI P K+P+LF+++G+ K
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSK 763
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 33.9 bits (74), Expect = 0.097
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +1
Query: 526 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
E VGG+ +Q K +++VI P K+P+LF+++G+ K
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSK 37
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 475 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF 606
D L +++EK P+ + + GL+ + +KE + LP+K P+LF
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLF 144
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 301 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 387
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 301 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 387
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 508 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 621
VPD +++ +G L + K+++ I P+K + F ALGI
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGI 564
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 508 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 621
VPD +++ +G L + K+++ I P+K + F ALGI
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGI 564
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 532 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 633
V GL+ K ++E++ LP K P++F + A PK
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPK 350
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 397 NDVTANCRVALRNESYTLHK-ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 573
N++T C V HK IL N ++ M+EK P+ST+E + K K IK+
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTMIEKNPESTFEDI--YTKHCKLIKKQ 212
Query: 574 IE 579
E
Sbjct: 213 SE 214
>AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear receptor
NHR-18 protein.
Length = 392
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 391 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 561
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 316 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 374
Query: 562 IKEVIELPVKHPELFDA 612
+ ++++ HPE+F+A
Sbjct: 375 VFNIMKIDFSHPEMFEA 391
>AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 18 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 391 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 561
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 318 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 376
Query: 562 IKEVIELPVKHPELFDA 612
+ ++++ HPE+F+A
Sbjct: 377 VFNIMKIDFSHPEMFEA 393
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 367 VVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 546
V++ D N+++ + ANC + N T + V P++ EK P +V +D
Sbjct: 351 VLEKDANINVAALAANCITGIANGLRTKFQPFAVSVTPIIFEKFKEKKPTLRDPLVACID 410
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 429 KSDTTIGRDIVNINVLV*IDDEFTFRMNFYEDLLFIHRFNHFSDVRSLFLQEL 271
K D + D+ N+L DE TF ++ D IH N D+ LFL L
Sbjct: 272 KRDVMVHGDLWAANILWKEKDEGTFSVSKVIDYQLIHMGNPAEDLVRLFLSTL 324
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 367 VVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 546
V++ D N+++ + ANC + N T + V P++ EK P +V +D
Sbjct: 351 VLEKDANINVAALAANCITGIANGLRTKFQPFAVSVTPIIFEKFKEKKPTLRDPLVACID 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,429,898
Number of Sequences: 27780
Number of extensions: 267341
Number of successful extensions: 847
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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