Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1884
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 201 2e-52
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.002
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.089
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 1.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 1.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 29 1.9
AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 29 1.9
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 3.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 3.3
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 5.8
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 5.8
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 5.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 7.7
AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid deplete... 27 7.7
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 201 bits (491), Expect = 2e-52
Identities = 96/142 (67%), Positives = 112/142 (78%)
Frame = -2
Query: 490 EAKSKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 311
EA KLCKVK V T K VP L T DGRTIRYPDP +KVND+I +I+T KI D +KFE
Sbjct: 117 EADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEP 176
Query: 310 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 131
GNL +TGGRN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +S
Sbjct: 177 GNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVS 236
Query: 130 LPRGKGIRLTIAEERDKRIAAK 65
LP G GIRL+IAEERDKR+A K
Sbjct: 237 LPTGAGIRLSIAEERDKRMAQK 258
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 263 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 84
HHR E AH G HGTH H E H+ H G H + H P H G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459
Query: 83 QAHRS 69
+ H +
Sbjct: 460 EHHHA 464
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 263 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 99
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = -1
Query: 272 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 96
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521
Query: 95 RGAGQAHRSQGRRA 54
G H + A
Sbjct: 522 HGTHHGHHGEHHHA 535
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -1
Query: 224 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 75
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 35.1 bits (77), Expect = 0.029
Identities = 28/115 (24%), Positives = 36/115 (31%), Gaps = 2/115 (1%)
Frame = -1
Query: 407 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACG-HHRVPRETSR 234
HH + + H P H ++ ++G H H G G HH P
Sbjct: 462 HHAPAHHGHHGEHHHAPAHHGHHGEHGTHH---GHHGSHHSPAHHGHHGEHHHAPAHHGH 518
Query: 233 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 69
H H HG H H H G G H H P H G+ H +
Sbjct: 519 ---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 35.1 bits (77), Expect = 0.029
Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Frame = -1
Query: 293 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 123
HG G+ G H T L H H G HGTH H H+ HE G H A
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAH 702
Query: 122 RQGHPP---HHRRGAGQAH 75
H HH G H
Sbjct: 703 HGHHDDKENHHHHGHHSKH 721
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/115 (23%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
Frame = -1
Query: 407 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRL 231
HH + + H P H ++ ++G H E + H G G H
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGE--HHHAPAHHGHHGEHGTHHGHHGS 554
Query: 230 LRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 66
AH G HG H H G GVH + H H A H +
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
Score = 33.5 bits (73), Expect = 0.089
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -1
Query: 263 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 84
HH P H G HG H H GH G H H P H G
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689
Query: 83 QAHRSQG 63
AH G
Sbjct: 690 GAHHEHG 696
Score = 32.3 bits (70), Expect = 0.21
Identities = 30/117 (25%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
Frame = -1
Query: 407 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELV-YDHGRP*LGACGHH--RVPRET 240
HH + + H P H ++ +G H V + HG GHH
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHG 614
Query: 239 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 75
+ AH G HG H H H G H G H GH H A H
Sbjct: 615 HHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = -1
Query: 263 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 96
HH E H H G HG+ H HE H+ H G H H HH
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617
Query: 95 RGAGQAHRSQG 63
G G H G
Sbjct: 618 AGYGAHHGHHG 628
Score = 30.3 bits (65), Expect = 0.83
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -1
Query: 218 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 54
AH G HG H H H+ GH G H GH H A H + A
Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 263 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 87
HH P H HG H H GH G H + A G H HH A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514
Query: 86 GQAHRSQ 66
H +
Sbjct: 515 HHGHHGE 521
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = -1
Query: 236 RLLRHCAHQGLHGT-HLRHEVE-QRVHNRQGHEG-------VHLAAARQGHPPHHRRGAG 84
+L R A LH HL E+ Q+V + H+G + + GH HH GA
Sbjct: 30 KLTRDEARSALHDIEHLAKELHFQKVFDHHAHDGHISLKGFLSFISPHHGHHTHHAHGAH 89
Query: 83 QAH 75
H
Sbjct: 90 PGH 92
Score = 27.1 bits (57), Expect = 7.7
Identities = 30/116 (25%), Positives = 36/116 (31%), Gaps = 12/116 (10%)
Frame = -1
Query: 365 HPVRHRNY-EDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRLLRHC------AHQG 207
H V HR++ E +G H +HG HH P H AH G
Sbjct: 399 HGVHHRHHGEHHGTHHSPAHH--GEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHG 456
Query: 206 LHGTH----LRHEVEQRVHNRQGHEGVH-LAAARQGHPPHHRRGAGQAHRSQGRRA 54
HG H H H+ H G H GH H A H + A
Sbjct: 457 HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 512
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.089
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 224 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 63
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 0.22
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 224 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 99
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 209 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 60
G HG H RH R GH G +R G P G H GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333
Score = 21.4 bits (43), Expect(2) = 0.22
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 110 PPHHRRGAGQAHRSQGRRA 54
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 76 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 195
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 76 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 195
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 76 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 195
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 76 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 195
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical
protein Y48B6A.13b protein.
Length = 377
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 305 LVYDHGRP*LGACGHHRVPRETSRLLRH 222
LV+D GR +G+ R RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234
>AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical
protein Y48B6A.13a protein.
Length = 326
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 305 LVYDHGRP*LGACGHHRVPRETSRLLRH 222
LV+D GR +G+ R RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 407 HHPLPRPTYQSQRFHPVRHRNYEDYGLH 324
HH PTY F+P H++Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 112 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 201
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 239 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 63
+R RH H+G HG ++H H H R G H P+ H +
Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143
Query: 62 RRAV 51
+R++
Sbjct: 144 KRSI 147
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 76 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 195
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 167 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 72
VH+ H+G H R+ H HH G H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -1
Query: 215 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 90
H G TH H+ + GH G H + + H H G
Sbjct: 43 HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 117 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 233
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 117 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 233
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 264 APSCPARDIPAPSTLCTSRTPRDTPSP 184
AP CP PAP+ C P TPSP
Sbjct: 107 APCCPPP--PAPAAPCCPPPPPPTPSP 131
>Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical
protein F09C6.13 protein.
Length = 77
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 322 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIK 209
K +SGN + T R++ R+ V E H D+ H++
Sbjct: 12 KVDSGNTTINTTNRSINRIDNSVDYESHGLDTDLEHLQ 49
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 239 SRLLRHCA--HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 111
S LL CA H G+ L+H V + G +HLAA GH
Sbjct: 842 SPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAF-NGH 885
>AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid depleted
protein 5 protein.
Length = 176
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -2
Query: 457 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 329
++TG N+P +HD + + D L K + + +++ + MD
Sbjct: 20 LSTGKDNLPVTRSHDAKKVELNDILDKPSQKTPVKVSSDETMD 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,894,016
Number of Sequences: 27780
Number of extensions: 272103
Number of successful extensions: 1001
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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