Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1878
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0173 - 13749975-13750052,13751097-13751216,13752095-137523...    29   3.1  
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270...    29   5.4  

>08_02_0173 -
           13749975-13750052,13751097-13751216,13752095-13752348,
           13752353-13752651,13753091-13753197,13753293-13753431,
           13753863-13754030,13755367-13755476,13755830-13755934,
           13757398-13757499,13757546-13757671,13757843-13758055,
           13758133-13758195
          Length = 627

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 688 VLFFKIKEHLLRHNYNS*TYADATLFVNNN 777
           VLF+KI E L  H YN+  Y+  TL + +N
Sbjct: 220 VLFYKILEELHSHLYNNGEYSSVTLSMVDN 249


>04_03_0830 -
           20125827-20125913,20126262-20126357,20126974-20127053,
           20127124-20127220,20127457-20127544,20128491-20128576,
           20129358-20130530
          Length = 568

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 311 PLHPPPASMITSTELSH 261
           P HPPPAS  +ST  SH
Sbjct: 71  PFHPPPASASSSTPTSH 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,018,642
Number of Sequences: 37544
Number of extensions: 347417
Number of successful extensions: 688
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)