Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1875
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    28   0.38 
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   3.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   3.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   3.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   6.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +2

Query: 224  GSLTLKLRSLQVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAH 373
            G  T +   +Q+QP++  +     Q  Q +  Q QQ+ Q    H + + H
Sbjct: 1279 GMPTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQH 1328



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 236  LKLRSLQVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAH 373
            ++L+ +Q QP++   + Y +Q  Q    Q QQ+ Q       Q  H
Sbjct: 1288 IQLQPIQ-QPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQH 1332


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 TALMTCHVHLCPSLFI 518
           T   TCH HL PSL I
Sbjct: 96  TTTSTCHSHLLPSLAI 111


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 TALMTCHVHLCPSLFI 518
           T   TCH HL PSL I
Sbjct: 96  TTTSTCHSHLLPSLAI 111


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 245 RSLQVQPVKVQMNYYHKQRSQLMTSQH-QQEDQWMISHLKQK 367
           R  Q Q  + Q     +Q+ Q    QH QQ+ QW     +Q+
Sbjct: 336 RQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQ 377


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 236 LKLRSLQVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAHLMI*KN 391
           LK   + + P     N  H Q SQ   S  QQ+       L+Q   +++ KN
Sbjct: 115 LKKDEVCINPYHYARNESHSQHSQQQQSPQQQQSS---QQLQQPLTILVPKN 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,185
Number of Sequences: 2352
Number of extensions: 14838
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)