Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1875
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.94
AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical... 30 1.6
AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical ... 29 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 6.6
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.6
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 6.6
>Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical
protein F15D3.6 protein.
Length = 209
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/109 (32%), Positives = 57/109 (52%)
Frame = +1
Query: 4 TLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYMEDLLTNKISL 183
+L T NL ++ VDE + YTP D +KT+LKQ+ +VT+ + Y E + S
Sbjct: 90 SLTTRNLNGSSFLRVDEKLTYTPAHEDPNKTILKQDVIVTITLPAFADYCEKTFLSIYSQ 149
Query: 184 NAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSA 330
NA KGRQ +EWVI E + +++ E+ + +S ++S+
Sbjct: 150 NANKGRQGVEWVIDHLKKEYEAISTKVSSEVHEMSEKVLRSFGTTSSSS 198
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 3136 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDVGNAVK 3195
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 3196 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 3255
Query: 370 TLDDIEK 390
L +EK
Sbjct: 3256 LLQALEK 3262
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 4993 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDVGNAVK 5052
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 5053 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 5112
Query: 370 TLDDIEK 390
L +EK
Sbjct: 5113 LLQALEK 5119
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 5896 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDVGNAVK 5955
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 5956 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 6015
Query: 370 TLDDIEK 390
L +EK
Sbjct: 6016 LLQALEK 6022
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 6799 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDVGNAVK 6858
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 6859 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 6918
Query: 370 TLDDIEK 390
L +EK
Sbjct: 6919 LLQALEK 6925
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 7702 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDVGNAVK 7761
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 7762 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 7821
Query: 370 TLDDIEK 390
L +EK
Sbjct: 7822 LLQALEK 7828
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +1
Query: 34 HYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYM---EDLLTNKISLNAGKGRQ 204
H + E V P + S L+ A V + + ++ +++ + G +
Sbjct: 4039 HLATLVEAVNDVPASVEPSAVALRDRAAKFVSDLEKNIQKTGDDEKRADELKNDDGNAVK 4098
Query: 205 AIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKS 369
+E V+ K+ + + L ++ K+T E L++ +S D I + + D +KAK
Sbjct: 4099 NVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKE 4158
Query: 370 TLDDIEK 390
L +EK
Sbjct: 4159 LLQALEK 4165
>AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical
protein Y53F4B.20 protein.
Length = 725
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = -3
Query: 575 IKDTKLCYYIYCY*INHVNDE*TRTQMNMAGH*CSPFSIYVLQ-RHAYYSSFQLLWLALA 399
I + LC+ + + H+ E T T +N++ H + F + Q +H +++ Q+L L
Sbjct: 230 ITPSMLCFLLLPHEYTHI--ESTYTGVNISVH-YNRFRVQKEQTKHLLHTATQVLALLKD 286
Query: 398 LVN--FSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQA 261
+ + + + ++E+SS +V+S + FF D + V + A
Sbjct: 287 IFSSLIPVPKIDIITMNEVSSTACFGSIVVSEVQFFSADYANQVKMLA 334
>AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical
protein Y39C12A.1 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 223 GKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLT 396
G E E ++ KS EL +TKKS+ S D + ++ S L+++E ++
Sbjct: 212 GSSTRESSEKTTATLKSIKELNQETKKSVMTALESLGSGQDKVRAQLISILNNVETIS 269
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 284 YYHKQRSQLMTSQHQQEDQ 340
YYH Q+ QL HQQ+ Q
Sbjct: 177 YYHNQQKQLQQQHHQQQQQ 195
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 259 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 390
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 259 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 390
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 268 KSTDELLSQTKKSIDDITTSARRSMDDISSK 360
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 259 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 390
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 259 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 390
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 226 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKA 402
K E+KE+ K DE+ SQ+K + I SA S+DD + LD +++ KA
Sbjct: 303 KNSRELKEINDLIKKIKDEVESQSKGAAGAI-DSAEVSLDDTINSIVHFLDKLQQEVKA 360
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -3
Query: 404 LALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNF 225
+ +V ++ ++V+ L++I+SID LAD+V ++ +S + E A L+ +F
Sbjct: 92 IGIVTYNRDATVVADLNKITSIDQLADIVFGALHKASSIADSYLHAGLEAADDLLQRQSF 151
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 268 KSTDELLSQTKKSIDDITTSARRSMDDISSK 360
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,076,215
Number of Sequences: 27780
Number of extensions: 346947
Number of successful extensions: 955
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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