Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1872
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75JJ0 Cluster: Similar to Dictyostelium discoideum (Sl...    34   2.4  
UniRef50_Q8IKD2 Cluster: Putative uncharacterized protein; n=3; ...    34   3.1  
UniRef50_Q86IF9 Cluster: Similar to phosphatidylethanolamine met...    33   7.2  
UniRef50_A7E596 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   7.2  

>UniRef50_Q75JJ0 Cluster: Similar to Dictyostelium discoideum (Slime
           mold). Histidine kinase A; n=2; Dictyostelium
           discoideum|Rep: Similar to Dictyostelium discoideum
           (Slime mold). Histidine kinase A - Dictyostelium
           discoideum (Slime mold)
          Length = 828

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -2

Query: 251 FEVTKNFTKQNKV*MYPNRYIVQLINSNPVDSSQDNDHTRNNDS 120
           F++ KNF   N     PN Y   +I S P++S  +N++  NN++
Sbjct: 116 FKINKNFNNNNFTDESPNNYSNCVIASTPLNSINNNNNNNNNNN 159


>UniRef50_Q8IKD2 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 532

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 260 QHIFEVTKNFTKQNKV*MYPNRYIVQLINSNPVDSSQDNDHTRN 129
           QHI   + N+TK+N V  Y N+Y    I+ NP  +  +N+ T N
Sbjct: 76  QHIQYNSNNYTKKNYVHNYENKYNNDKISVNPNMNQMENNMTHN 119


>UniRef50_Q86IF9 Cluster: Similar to phosphatidylethanolamine
           methyltransferase; n=2; Dictyostelium discoideum|Rep:
           Similar to phosphatidylethanolamine methyltransferase -
           Dictyostelium discoideum (Slime mold)
          Length = 736

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 616 LNYLFIYTIAS*LQDAHTVLYYSLFQRNCTYIFLEIVSE 500
           + Y F Y  AS +  ++TVLY SLF   C  IFL +V +
Sbjct: 337 IGYTFYYG-ASLITQSYTVLYVSLFAHFCQLIFLVLVED 374


>UniRef50_A7E596 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 469

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 487 KVSQLLKLFLKKYMYNFFEIGYNIKQYERLVTRM 588
           KVSQ+LK  L+K+M     I +N+  + RL T++
Sbjct: 384 KVSQMLKSKLEKWMETVLPINFNVHHHTRLTTKL 417


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,928,151
Number of Sequences: 1657284
Number of extensions: 8417587
Number of successful extensions: 22845
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22776
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)