Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1869
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0202 - 9874205-9874762 33 0.23
06_01_1013 - 7931756-7935109 31 0.70
01_06_1732 - 39531577-39531726,39531809-39531925,39532175-395323... 31 1.2
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 30 1.6
02_03_0345 + 17973509-17974131,17974207-17974537,17974624-179749... 30 1.6
10_07_0034 - 12163944-12164537 30 2.1
07_03_0676 + 20618677-20618840,20618938-20619502 30 2.1
04_01_0209 + 2603411-2603538,2603580-2604096 30 2.1
12_02_0907 - 24210889-24211149,24211264-24211332,24212124-24212222 29 2.8
04_04_1016 - 30139691-30139951,30140066-30140134,30141267-301414... 29 2.8
04_04_1009 - 30078988-30079248,30079363-30079431,30080564-300807... 29 2.8
01_01_0191 - 1669631-1669924 29 2.8
08_01_0150 - 1179147-1179899,1180025-1180579 29 3.7
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 3.7
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 3.7
02_02_0210 + 7873962-7874753 29 3.7
02_02_0209 + 7866348-7867139 29 3.7
12_01_0159 + 1210888-1211346 28 8.6
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 28 8.6
08_02_0126 + 12835431-12838183,12838471-12838566,12838920-128389... 28 8.6
02_05_1127 + 34292894-34293284,34293948-34295443 28 8.6
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 28 8.6
>05_03_0202 - 9874205-9874762
Length = 185
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP P R GG G+ +PR T R D A R+ LE
Sbjct: 53 RQRHCFAGEDASP--VLPPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 106
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 107 AEEREG-RRQERASGGHRA 124
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = -3
Query: 270 TATSSCATRSWQ-GAGGRCDN---CRRQPCSAACRSGACDDDRDLTS 142
T CA R+ G RCD CRR C C +G C D L S
Sbjct: 299 TIVRRCADRTTPVTCGQRCDRLLPCRRHRCEKVCHTGPCGDCNVLIS 345
>01_06_1732 -
39531577-39531726,39531809-39531925,39532175-39532354,
39532704-39532802,39533571-39533675,39534046-39534138,
39534243-39534326
Length = 275
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 191 LQGCLLQLSQRPPAPCHDLVAQLDVAVRQYLPRNNRISVYEQSLYWTVLFALVELGHPDL 370
+QG L +LSQ LVA+ D +++YL I+ + W L E D
Sbjct: 160 IQGTLSKLSQ--------LVAKYDGELQRYLEITTEINPQFYAFRWITLLLTQEFNFADT 211
Query: 371 VHIAVDFVLTDP 406
+HI D +L+DP
Sbjct: 212 IHI-WDTLLSDP 222
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 445 DCAEESSPPQAAPQRRGGQVPGQHRQPRGTTR-RADINAASVY----*RQAFELEERDRR 609
D A+ +PP ++ +R+G + G P G R RA + R+ E+ D
Sbjct: 108 DSADREAPPPSSRKRKGHEGGGNESDPEGGKRARASVEPPPPKEERPRRERRRFEDADAN 167
Query: 610 VQHGSRR--ADDVNGTHNA 660
+HG R D N H A
Sbjct: 168 GKHGDERGKGDKDNSNHGA 186
>02_03_0345 +
17973509-17974131,17974207-17974537,17974624-17974985,
17975314-17975572
Length = 524
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 113 LQELSTVHQKLVKSLSSSHAPLRQAALQGCLLQLSQRPPAPCHD 244
LQ L +K + + S HAP ++ + G LL L ++ P C D
Sbjct: 267 LQRLIDDQRKDMDADSDDHAPAKRRTMIGVLLSLQRKDPDSCPD 310
>10_07_0034 - 12163944-12164537
Length = 197
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP R GG G+ +PR T R D A R+ LE
Sbjct: 61 RQRHCFAGEDASP--VLSPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 114
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 115 AEEREG-RRRERASGGHRA 132
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP R GG G+ +PR T R D A R+ LE
Sbjct: 124 RQRHCFAGEDASP--VLSPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 177
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 178 AEEREG-RRRERASGGHRA 195
>04_01_0209 + 2603411-2603538,2603580-2604096
Length = 214
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP R GG G+ +PR T R D A R+ LE
Sbjct: 82 RQRHCFAGEDASP--VLSPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 135
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 136 AEEREG-RRRERASGGHRA 153
>12_02_0907 - 24210889-24211149,24211264-24211332,24212124-24212222
Length = 142
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 435 GALRLR*GIKSSPSSSAAPRWTSSWAAPTAA 527
G +RL I SS SSSA+P WT S AA TAA
Sbjct: 73 GEVRLL-AISSSSSSSASP-WTGSSAAATAA 101
>04_04_1016 -
30139691-30139951,30140066-30140134,30141267-30141470,
30141552-30141808,30141899-30141983,30142080-30142164,
30142269-30142795
Length = 495
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 435 GALRLR*GIKSSPSSSAAPRWTSSWAAPTAA 527
G +RL I SS SSSA+P WT S AA TAA
Sbjct: 426 GEVRLL-AISSSSSSSASP-WTGSSAAATAA 454
>04_04_1009 -
30078988-30079248,30079363-30079431,30080564-30080767,
30080849-30081105,30081196-30081280,30081377-30081461,
30081566-30082092
Length = 495
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 435 GALRLR*GIKSSPSSSAAPRWTSSWAAPTAA 527
G +RL I SS SSSA+P WT S AA TAA
Sbjct: 426 GEVRLL-AISSSSSSSASP-WTGSSAAATAA 454
>01_01_0191 - 1669631-1669924
Length = 97
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 459 IKSSPSSSAAPRWTSSWAAPTAAR 530
+ S P +AAPRW+SS A+ AAR
Sbjct: 56 VGSRPVPAAAPRWSSSSASEAAAR 79
>08_01_0150 - 1179147-1179899,1180025-1180579
Length = 435
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 191 LQGCLLQLSQRPPAPCHDLVAQLDVAVRQYLPRNNRISVYEQSLYWTVLFALVELGHPDL 370
L GC L C L ++ ++ + R+ I + E + W VL AL+ + P
Sbjct: 46 LDGCFLLKYMVLDNDCSLLENRMVLSTGPCIQRD--IVLLENQIPWLVLDALMSIISPID 103
Query: 371 VHIAVDFVLTDPTHYCTE 424
VH+ + V++DP + E
Sbjct: 104 VHMFLTAVISDPIYVARE 121
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 445 DCAEESSPPQAAPQRRGGQVPGQHRQPRGTTRRAD 549
D A+ESS ++ P++ G VPG+ P+ + D
Sbjct: 321 DLAQESSTTKSIPEQAGKPVPGKTSTPKPVNKPTD 355
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 398 TDPTHYCTELVVRGIATALRNQVLPKQLRSAAVDKFLGSTDSRAERHVVLILMLHLFTDD 577
TDP C R + +LR+ P++ R A++K+ GSTD V ++ DD
Sbjct: 420 TDPNAGC-----RAFSRSLRDVRWPERFRPRAIEKYDGSTDPEEFLQVYSTVLYAAGADD 474
Query: 578 KLL 586
L
Sbjct: 475 NAL 477
>02_02_0210 + 7873962-7874753
Length = 263
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP R GG G+ +PR T R D A R+ LE
Sbjct: 127 RQRHCFAGEDASP--VLSPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 180
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 181 AEEREG-RRWERASGGHRA 198
>02_02_0209 + 7866348-7867139
Length = 263
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 430 RQGHCDCAEESSPPQAAPQRRGGQVPGQH--RQPRGTTRRADINAASVY*RQAFELEERD 603
RQ HC E++SP R GG G+ +PR T R D A R+ LE
Sbjct: 127 RQRHCFAGEDASP--VLSPRNGGLTEGEEVAARPREKTARPDGAPA----RRERRLEAAG 180
Query: 604 RRVQHGSRRADDVNGTHNA 660
+ G RR + +G H A
Sbjct: 181 AEEREG-RRWERASGGHRA 198
>12_01_0159 + 1210888-1211346
Length = 152
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 334 DGPVQALLVNRYPVVPGQVLS--DGDVELRDEVVAGRGRALRQLQEAA 197
DG Q +V YP++PG DG+ +E G AL L EAA
Sbjct: 51 DGGAQQRIVFAYPILPGDAFERMDGETLSWEEPECGDEFALCFLDEAA 98
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 451 AEESSPPQAAPQRRGGQVPGQHRQPRGTTRRA 546
A +P Q +P G +PG QPRG RA
Sbjct: 453 AGSGTPRQISPTLSGSGLPGAGGQPRGPAARA 484
>08_02_0126 + 12835431-12838183,12838471-12838566,12838920-12838971,
12839198-12839298,12839349-12839370
Length = 1007
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 279 YCLTATSSCATRSWQGAGGRCDNCRRQPCSAACRSGAC 166
Y + A + RSW+ G +R CS +C +G C
Sbjct: 907 YTILAREASKKRSWKHVAGCITKVKRATCSTSC-TGQC 943
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 442 CDCAEESSPPQAAPQRRGGQVPGQHRQPRGTTRRADINAASVY*RQAFELEERDRR 609
C A S +++ + PG+ R P TRRA + +A LE R RR
Sbjct: 27 CSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLERRRRR 82
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +2
Query: 443 ATALRNQVLPKQLRSAAVDKFLGSTDSRAERHVVLILMLHLFTDDKLLNSKNATDVSNMD 622
ATA R + + R AA + +++E++ V I L T L ++KN +
Sbjct: 200 ATAARRRAEAEARRRAAAAAASSGSGTKSEQNTVTISSLQSSTHRILKSNKNCRGEHGDE 259
Query: 623 PDVLMTSMERITL 661
PD ++ R L
Sbjct: 260 PDATDVAVSRAAL 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,705,280
Number of Sequences: 37544
Number of extensions: 272745
Number of successful extensions: 1435
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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