Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1860
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4589 Cluster: PREDICTED: similar to protease, ...    35   1.9  
UniRef50_UPI00015B4E64 Cluster: PREDICTED: similar to AT07338p; ...    34   4.3  
UniRef50_UPI0000D56579 Cluster: PREDICTED: similar to CG2663-PB,...    33   9.9  
UniRef50_UPI00015A65F1 Cluster: zinc finger protein, multitype 2...    33   9.9  

>UniRef50_UPI00015B4589 Cluster: PREDICTED: similar to protease,
           reverse transcriptase, ribonuclease H, integrase; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to protease,
           reverse transcriptase, ribonuclease H, integrase -
           Nasonia vitripennis
          Length = 807

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -1

Query: 645 NAAKSRTKQFMPKRERP*QISNIISPTTYEVTDLNSQILGKFHASHLKPY 496
           NAAK+   + + K + P  ++ +ISP  YE+   + ++L + H + LK Y
Sbjct: 748 NAAKNVAAKLVNKFKGPFTVTKVISPLIYELVGGDGKVLPRIHITDLKRY 797


>UniRef50_UPI00015B4E64 Cluster: PREDICTED: similar to AT07338p;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           AT07338p - Nasonia vitripennis
          Length = 289

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 597 P*QISNIISPTTYEVTDLNSQILGKFHASHLKPYRNQT 484
           P  ++ ++ P  YE+    + ++ K H   LKPYR  T
Sbjct: 248 PYTVTKVLLPLVYELVSAENHLVSKIHICDLKPYRQNT 285


>UniRef50_UPI0000D56579 Cluster: PREDICTED: similar to CG2663-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG2663-PB, isoform B - Tribolium castaneum
          Length = 264

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 225 RFSIKTTYKSVSFPYLLRANSPEHRTHKNSQKPHRSE 115
           +FSI+ T +S+   Y +R   PE   H N QKP+ +E
Sbjct: 57  KFSIERTKQSIDMYYTVRTLIPELYEHVNPQKPNMAE 93


>UniRef50_UPI00015A65F1 Cluster: zinc finger protein, multitype 2a;
           n=1; Danio rerio|Rep: zinc finger protein, multitype 2a
           - Danio rerio
          Length = 961

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
 Frame = -1

Query: 597 P*QISNIISPT---TYEVTD--LNSQILGKFHASHLKPYRNQTGQVSAPVQPRRLRGRPR 433
           P ++S+ ISP    T+ VT   LNS +L   +A    P +  TGQV     P  +  R  
Sbjct: 477 PDKVSDAISPNSGHTHVVTTACLNSSVLDIMNAGGKVPEKELTGQVKKVTTPTGVEER-- 534

Query: 432 LVASAEPPTRRSSDSEGEDITEPSIRTCD 346
            +   +P  +  S S  +  ++P+  TC+
Sbjct: 535 -LGGKQPEVKSPSTSLVDGDSDPNKTTCE 562


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,296,003
Number of Sequences: 1657284
Number of extensions: 11704122
Number of successful extensions: 32985
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32969
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)