Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1854
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.22 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.22 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.22 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.66 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 19/99 (19%), Positives = 43/99 (43%)
 Frame = +2

Query: 107 TKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMD 286
           ++  R + P    NN+N +++  S  +N +    S ++NN S +    + K  T    ++
Sbjct: 185 SRDERDSLPNASSNNSNNNNN--SSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLE 242

Query: 287 QPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
           + ++    Q H      PS +     +H  ++    +H+
Sbjct: 243 RLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 281


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 19/99 (19%), Positives = 43/99 (43%)
 Frame = +2

Query: 107 TKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMD 286
           ++  R + P    NN+N +++  S  +N +    S ++NN S +    + K  T    ++
Sbjct: 185 SRDERDSLPNASSNNSNNNNN--SSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLE 242

Query: 287 QPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
           + ++    Q H      PS +     +H  ++    +H+
Sbjct: 243 RLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 281


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 19/99 (19%), Positives = 43/99 (43%)
 Frame = +2

Query: 107 TKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMD 286
           ++  R + P    NN+N +++  S  +N +    S ++NN S +    + K  T    ++
Sbjct: 137 SRDERDSLPNASSNNSNNNNN--SSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLE 194

Query: 287 QPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
           + ++    Q H      PS +     +H  ++    +H+
Sbjct: 195 RLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 233


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 20/93 (21%), Positives = 41/93 (44%)
 Frame = +2

Query: 107 TKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMD 286
           ++  R + P    NN+N +++  S  +N +    S ++NN S +    + K  T    ++
Sbjct: 185 SRDERDSLPNASSNNSNNNNN--SSGNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLE 242

Query: 287 QPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQ 385
           + ++    Q H      PS +     +H P+ Q
Sbjct: 243 RLQQQQQQQTHHQQQQHPSSHQQQSQQH-PSSQ 274



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
 Frame = +2

Query: 317 HRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKK 496
           + N +I+ + N N    H P +   ++  E   +    ++ QT ++   +  S Q + ++
Sbjct: 210 NNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQ 269

Query: 497 FNTKSIQTDPISVQKETTKSTDVFER--MKEIDLEIQVLLQEKFKLYNSFESNNTCP 661
             +   Q    S   +  +S  V ER  +   D EI   ++ K K   S   +N+ P
Sbjct: 270 HPSSQHQQPSRSASIDLMQSALVDERDYLAAEDREIST-VENKKKRKMSTTCDNSSP 325


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 116 HRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQS 232
           H +TTP     +T +SHS ++   N  P   S    N +
Sbjct: 357 HIYTTPSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGNNN 395


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 533  VQKETTKSTDVFERMKEIDLEIQVLLQEKFKLYNSFE 643
            VQK   +  D   RM+E   +IQ  L++K K    FE
Sbjct: 892  VQKSFREKQDQLARMREHYEQIQRELKDKLKRPTPFE 928


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,735
Number of Sequences: 2352
Number of extensions: 11960
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)