Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1853
(712 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 46 2e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 44 6e-06
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 42 1e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 41 3e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 40 6e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 39 2e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 38 3e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 36 0.002
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 33 0.007
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 29 0.11
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 28 0.33
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 25 2.3
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 7.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 7.2
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 9.5
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 45.6 bits (103), Expect = 2e-06
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 336 IVIASVYLPPDKIVLSSD--IEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRLD 500
+V S Y PP + + +EA+ G S V++AGD N +H W S T G L
Sbjct: 96 VVFISCYAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGEELH 155
Query: 501 ALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS-IEVVSELDSDHRPVV 677
+V+ L ++ + N P I+D+A R + + S SDHR V+
Sbjct: 156 GMVEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTWVVSTSYTASDHRYVL 215
Query: 678 MKLG 689
+G
Sbjct: 216 YTVG 219
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 43.6 bits (98), Expect = 6e-06
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 420 VILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIA 599
V+ AGDLN H W S T G + LVD+L +++ T + N RP ++D+A
Sbjct: 116 VVFAGDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVA 175
Query: 600 LLKNVTLRLHSI 635
+ +++I
Sbjct: 176 FASSSIAGVNTI 187
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 42.3 bits (95), Expect = 1e-05
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Frame = +3
Query: 330 APIVIASVYLPP-------DKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNG 488
A I SVY PP ++++ + ++EA S V++AGD N H W S G
Sbjct: 83 AGIDFISVYAPPSLSPQEYERLLEAVELEA--SSHSHVVIAGDFNAWHTEWGSRRNNLRG 140
Query: 489 RRLDALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSI-EVVSELDSDH 665
L +V+ L I+ + + A RP ++D+ +L LH EV+ SDH
Sbjct: 141 EELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVT-FATPSLVLHDTWEVLDFARSDH 199
Query: 666 R 668
+
Sbjct: 200 Q 200
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 41.1 bits (92), Expect = 3e-05
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +3
Query: 414 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPLNIAHRPDILD 593
S V++AGD N H+ W S + G L + + L ++ T + + N A I+D
Sbjct: 117 SQVVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVD 176
Query: 594 IALLKNVTLRLHSIEVVSELD-SDHRPVVMKLG 689
+A + + V + SDHR + +G
Sbjct: 177 VAFATPTIAQPGTWNVCGDYSYSDHRYITYTVG 209
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 40.3 bits (90), Expect = 6e-05
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 363 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNL 518
P+ + I+ ++ S V+LAGD N H+ W S T P G L L DNL
Sbjct: 98 PEFRSIMEKIDLIVRGCSRVLLAGDFNAMHLDWGSSRTCPKGLELLQLADNL 149
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 38.7 bits (86), Expect = 2e-04
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 390 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPLNI 569
I+ L+ V+LAGD N H W S T P G L LV+ L +++ T +
Sbjct: 106 IDILIRGHPRVLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCG 165
Query: 570 AHRPDILDIA 599
+ RP +D+A
Sbjct: 166 SARPSRIDVA 175
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 37.9 bits (84), Expect = 3e-04
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 330 APIVIASVYLPPDKIVLSSDIEALLGM-------GSSVILAGDLNCKHIRWNSHTTTPNG 488
A I SVY PP + + + E LLG S V++AGD N H W S G
Sbjct: 146 AGITFISVYAPPS--LSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRG 203
Query: 489 RRLDALVDNLAFDIV-APLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDH 665
L V+ L I+ PT A ++D++ +R + V+ SDH
Sbjct: 204 IELLQTVETLGLSILNQGRKPTFIGRGFA-ASSVIDVSFASREIVRPDTWSVIPFSRSDH 262
Query: 666 RPVVMKLGRASDS 704
+ ++ + ++
Sbjct: 263 ELIAFEVKQPDEN 275
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.5 bits (78), Expect = 0.002
Identities = 21/94 (22%), Positives = 37/94 (39%)
Frame = +3
Query: 414 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPLNIAHRPDILD 593
S V++ GD N H W S + G L L+ ++ ++ + A ++D
Sbjct: 136 SQVVIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVID 195
Query: 594 IALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRA 695
+ R + EV SDH+ + +G A
Sbjct: 196 VCFATPSIARPETWEVHEFARSDHQLITYSVGEA 229
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 33.5 bits (73), Expect = 0.007
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +3
Query: 390 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIV-APLTPTHYPLN 566
+E + +V+L GD N H W S T G L V+ L ++ T T
Sbjct: 106 VEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRG 165
Query: 567 IAHRPDILDIALLKNVTLRLHSIEVV-SELDSDHRPVVMKLGRAS 698
IA ++D+ +R ++ EV+ S SDHR V + +S
Sbjct: 166 IAGE-SVIDVTFASPSIVRYNTWEVLKSYWYSDHRYVRFSVDSSS 209
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.5 bits (63), Expect = 0.11
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Frame = +3
Query: 336 IVIASVYLPPD--KIVLSSDIEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRLD 500
I S Y PP + + +EA+ S V++AGD N H W S + G L
Sbjct: 142 ITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRSNERGEVLL 201
Query: 501 ALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELD--SDHRPV 674
L ++ + N ++D+ + ++ S +V D SDHR +
Sbjct: 202 EASQQLGLLLMNRGNVATFVGNGVATASVVDVTFASS-SIAQPSTWLVRNTDTRSDHRYI 260
Query: 675 VMKLGRAS 698
+G AS
Sbjct: 261 TYSVGPAS 268
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 27.9 bits (59), Expect = 0.33
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Frame = +3
Query: 336 IVIASVYLPP----DKI-VLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD 500
+ S Y PP ++ V+ ++ A L +++AGD N + W S T G D
Sbjct: 80 VFFCSCYAPPSWELERFHVMLDNLVAELDGHRPLVIAGDFNAWAVEWGSKRTNSRG---D 136
Query: 501 ALVDNLA-FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELD-SDHRPV 674
A++++ A + T N R I+DI + V L SDH V
Sbjct: 137 AVLESFARLGVTLGNAGTTPTFNRNKRTSIVDITFCSTTLSERLNWRVSDALTLSDHNVV 196
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 25.0 bits (52), Expect = 2.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 55 LTLTVSQISVIRFLTFCVTIKLISF*CRRPYLSPRAVTLKSRTITWSGT 201
+ L+ ++V++ L+ + I++ Y R L R I WSGT
Sbjct: 248 IVLSTGPVTVLQMLSIVSAMGSIAWCMASHYRCVRFARLDKRHIPWSGT 296
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 23.4 bits (48), Expect = 7.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 270 DPPALANIEASVCRISLTGHAPIVIASVY 356
+PP A +E +V + +AP+ + S Y
Sbjct: 718 EPPLTAQVEVTVYVQDVNDYAPVFLESQY 746
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 7.2
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Frame = +3
Query: 336 IVIASVYLPPDKIVLS--------SDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 491
IV SVYLPP L+ ++I ++L ++ G +N W +G
Sbjct: 83 IVFCSVYLPPVGSDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDGE 142
Query: 492 RLD---ALVDNLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 656
R+ ++D A + L + + R I+D++ + ++ V E
Sbjct: 143 RVSRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDETP 202
Query: 657 SDHRPVVMKLGR 692
SDH + +GR
Sbjct: 203 SDHNTIKFVVGR 214
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 420 VILAGDLNCKHIRWNSHTTTPNG 488
+I++GD N W S +T G
Sbjct: 115 IIISGDFNAWATEWGSKSTNARG 137
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,889
Number of Sequences: 2352
Number of extensions: 14229
Number of successful extensions: 31
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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