Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1853
(712 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 111 7e-25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 104 1e-22
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 101 7e-22
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 95 6e-20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 94 2e-19
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 89 7e-18
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 87 3e-17
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 87 3e-17
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 87 3e-17
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 85 1e-16
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 81 1e-15
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 75 7e-14
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 75 1e-13
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 73 5e-13
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 73 5e-13
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 71 2e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 64 2e-10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 64 2e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 57 2e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 1e-06
BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p pro... 32 0.67
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 31 2.0
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 31 2.0
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 30 3.6
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 30 3.6
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny... 29 6.2
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA... 29 6.2
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 111 bits (268), Expect = 7e-25
Identities = 66/228 (28%), Positives = 121/228 (53%), Gaps = 4/228 (1%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 215
++ I +NA G++ ++ +++ FL + ID+ L+ ET L ++ + +I +Y+ +
Sbjct: 3 TLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLT-SKYNFQIRDYHFYGTNHPDG 61
Query: 216 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 389
+ GGT I R + A +++A+ I L + + +A+VY PP VL +
Sbjct: 62 KAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQF 121
Query: 390 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLA--FDIVAPLTPTHYPL 563
++ +G I AGD N KH W S P G++L + D V+P +PT++P
Sbjct: 122 LDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPS 181
Query: 564 NIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRASDSV 707
++ PD++D A+ KN++ L E + +L SDH PV++ L R +++V
Sbjct: 182 DLNKLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENV 229
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 104 bits (249), Expect = 1e-22
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS- 212
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSG 63
Query: 213 -ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 386
+RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 387 DIEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPL 563
D +++ +G+ I GD N KH W + + P G+ L ++ + + ++A PT Y
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSY 180
Query: 564 NIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
N P LD + + ++ + EL SDH P++ L
Sbjct: 181 NPLLTPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVL 221
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 101 bits (243), Expect = 7e-22
Identities = 76/231 (32%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Frame = +3
Query: 30 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMVRNDR 206
PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND
Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAET-PKLFGFVAYTANDP 59
Query: 207 LSARG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS 383
GG I + +L PL P A A ++ + I T PI +VY PP +
Sbjct: 60 SGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTT 118
Query: 384 SDIEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYP 560
+ + +L + I+AGD N H W + + G L LV N D +A PT YP
Sbjct: 119 DEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYP 178
Query: 561 LNIAHRPDILDIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRASDSVP 710
P +D AL K V L +H+ I V EL SDH P+V+ L + S P
Sbjct: 179 YGCRGSPGYIDFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYP 228
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 95.5 bits (227), Expect = 6e-20
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 215
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 216 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 389
+ GGT I R + L+ ++++ + L + +A+VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 390 -IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD-NLAFDIVAPLTPTHYP 560
+E +G I AGD N KH W S TP G++L +AL D V+P PT++P
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWP 179
Query: 561 LNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
+ PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 180 ADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 93.9 bits (223), Expect = 2e-19
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 215
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 216 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 389
+ GGT I R + L+ ++++ + L + +A+VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 390 -IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD-NLAFDIVAPLTPTHYP 560
+E +G I AGD N KH W S +P G++L +AL D V+P PT++P
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWP 179
Query: 561 LNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
+ PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 180 ADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 88.6 bits (210), Expect = 7e-18
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS- 212
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSG 63
Query: 213 -ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 386
+RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 387 DIEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPL 563
D +++ +G+ I GD N KH W + + P G+ L ++ + + ++A PT Y
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSY 180
Query: 564 N 566
N
Sbjct: 181 N 181
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 86.6 bits (205), Expect = 3e-17
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 209
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 210 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 362
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 363 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDNLAFDIVAP 539
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 540 LTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 193 GHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 86.6 bits (205), Expect = 3e-17
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 209
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 210 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 362
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 363 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDNLAFDIVAP 539
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 540 LTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 193 GHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 86.6 bits (205), Expect = 3e-17
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 209
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 210 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 362
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 363 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDNLAFDIVAP 539
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 540 LTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 193 GHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 84.6 bits (200), Expect = 1e-16
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 4/232 (1%)
Frame = +3
Query: 24 IKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRND 203
+ PL + I +NA G++ + V F + ++DI LV E LK KI Y
Sbjct: 1 MNPLKILI--WNANGISRKAKDVELFAHNKKVDILLVTELRLKRGET-VKIYGYAYYPAY 57
Query: 204 RLSARG---GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPD-K 371
R S GG ++ R L P +I+ S +++ TG + +++Y P +
Sbjct: 58 RPSLNNNSVGGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTR 116
Query: 372 IVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPT 551
I + + G ++ GD N +H W +P GR L + I+A +PT
Sbjct: 117 IEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPT 176
Query: 552 HYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRASDSV 707
YP +H P +D A+ + L +I +LDSDH P+++ + S V
Sbjct: 177 RYPYVPSHTPSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHV 228
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 81.0 bits (191), Expect = 1e-15
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Frame = +3
Query: 36 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 215
++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR +
Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69
Query: 216 RGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLP-------PDKI 374
RGGG I L + IE +I+ ++ + I S+Y P
Sbjct: 70 RGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSC 129
Query: 375 VLS-----------SDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLA 521
LS SD+ + + + ++ GD N +H W G+ L+ L D
Sbjct: 130 DLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGK 189
Query: 522 FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 683
F I+ P PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 190 FSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 242
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 75.4 bits (177), Expect = 7e-14
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Frame = +3
Query: 45 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 218
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 24 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKR 83
Query: 219 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 383
GG I H P++ + + + + IVIASVY PP
Sbjct: 84 GGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 143
Query: 384 SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTP 548
+D+ E +G + +IL GD N KH +W G L DA+ + +IVA +
Sbjct: 144 TDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSA 203
Query: 549 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + P +D ++ K + I + L SDH P+++++
Sbjct: 204 THFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLPILLEI 249
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.9 bits (176), Expect = 1e-13
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Frame = +3
Query: 45 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 218
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 219 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 383
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 384 SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTP 548
+D+ E LG + IL GD N KH +W G L +A+ + +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 549 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + P +D ++ K + I V++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLPILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 74.5 bits (175), Expect = 1e-13
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Frame = +3
Query: 45 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 218
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKR 71
Query: 219 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 383
GG I H P++ + + + + IVIASVY PP L
Sbjct: 72 GGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHF 131
Query: 384 SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTP 548
+D+ E LG + IL GD N KH +W G L +A+ + +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCA 191
Query: 549 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLPILLEI 237
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 72.5 bits (170), Expect = 5e-13
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Frame = +3
Query: 45 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 218
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 219 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 383
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 384 SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTP 548
+D+ E LG + IL GD N KH +W G L +A+ + +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 549 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 237
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 72.5 bits (170), Expect = 5e-13
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Frame = +3
Query: 45 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 218
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 219 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 383
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 384 SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTP 548
+D+ E LG + IL GD N KH +W G L +A+ + +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 549 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 237
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 70.9 bits (166), Expect = 2e-12
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Frame = +3
Query: 33 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRD---PK-IANYNMVRN 200
+++TI +N +G+ N ++++ ++DH DI +QET L + PK + Y +
Sbjct: 1 MTITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFS 60
Query: 201 DRLSARGGGTVIYYRRALHCVPLDPPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKI 374
SA+ G V+ R H NI +S+ C + L I I + Y+PP +I
Sbjct: 61 YNTSAKQGIGVLIKRNVPH-------TYRNINSSILCSALQLNFEQVINIVNAYIPPSQI 113
Query: 375 VLSSDI-EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPT 551
SSDI E L + S IL GDLN W S T G++++ ++ + ++ +PT
Sbjct: 114 FSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT 173
Query: 552 HYPLNIAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKL 686
H L+ + +DI+L+ + S + L SDH P+ + +
Sbjct: 174 H--LSTHNTFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITIHI 217
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Frame = +3
Query: 174 IANYNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASV 353
I Y + RNDR +RGGG I L + IE +I+ ++ + I S+
Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSI 63
Query: 354 YLP-------PDKIVLS-----------SDIEALLGMGSSVILAGDLNCKHIRWNSHTTT 479
Y P LS SD+ + + + ++ GD N +H W
Sbjct: 64 YFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 123
Query: 480 PNGRRLDALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDS 659
G+ L+ L D F I+ P PT+ P N + LD+ L N+ +L + V+ EL S
Sbjct: 124 GWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSS 182
Query: 660 DHRPVVMK 683
DH PVV+K
Sbjct: 183 DHLPVVIK 190
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 63.7 bits (148), Expect = 2e-10
Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Frame = +3
Query: 33 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS 212
+S+TI +N G N + ++ + I +QET ++ P NY ++ N +
Sbjct: 1 MSLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATN 60
Query: 213 ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDI 392
GG ++ ++ H V I+ I++ + I S Y+ P K + + +
Sbjct: 61 RFGGVRLLVHKSIQHTV-----LNITIDIEAIAINIESKLKLNIFSTYISPTKNITNQTL 115
Query: 393 EALLGMGSSV-ILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAPLTPTHYPLNI 569
+ + ++ GD N H W S TT G+ +DN+ ++ +PTH+ +
Sbjct: 116 HNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHN 175
Query: 570 AHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKL 686
+ +D+ L + +++++L SDH P++ L
Sbjct: 176 TYTH--IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTL 213
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 57.2 bits (132), Expect = 2e-08
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Frame = +3
Query: 129 LVQETLLKPARRDPKIANY--NMVRNDRLSARGGGTVIYYRRALHCV--PLDPPALANIE 296
+V ET L ++ Y + +N S RGG I H P++ + +
Sbjct: 2 IVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALEPIEKECIQSAP 61
Query: 297 ASVCRISLTGHAPIVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHI 455
+ + IVIASVY PP +D+ E LG + IL GD N KH
Sbjct: 62 IVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHR 121
Query: 456 RWNSHTTTPNGRRL-DALVDNLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 632
+W G L +A+ + +I+A TH+P + P +D ++ K +
Sbjct: 122 QWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKR 181
Query: 633 IEVVSELDSDHRPVVMKL 686
I ++L SDH P+++++
Sbjct: 182 ISSSADLSSDHLPILLEI 199
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 393 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDNLAFDIVAPLTPTHYPLNI 569
E LG + IL GD N KH +W G L +A+ + +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 570 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 686
P +D ++ K + I ++L SDH P+++++
Sbjct: 83 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 121
>BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p
protein.
Length = 85
Score = 32.3 bits (70), Expect = 0.67
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 183 YNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLP 362
Y M R DR S RGGG +I R L L N E ++S + + + I Y+P
Sbjct: 2 YTMYRYDRPSRRGGGVLIAVRSTLASEELLFDESRNSEFLCVKLSFSDRS-VYITCSYIP 60
Query: 363 P 365
P
Sbjct: 61 P 61
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 351 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 491
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 351 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 491
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 411 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAP 539
G S+ LA D+N K T T NG RLD++ +LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 411 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDNLAFDIVAP 539
G S+ LA D+N K T T NG RLD++ +LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
cyclase protein.
Length = 2248
Score = 29.1 bits (62), Expect = 6.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +3
Query: 72 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 236
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 237 YYRRALHCVPLDPP 278
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
protein.
Length = 2248
Score = 29.1 bits (62), Expect = 6.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +3
Query: 72 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 236
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 237 YYRRALHCVPLDPP 278
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,418,704
Number of Sequences: 53049
Number of extensions: 629090
Number of successful extensions: 1484
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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