Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1853
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.6  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   8.7  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 290 ISERGRIEWDAMQGSSIVNDGATTTSREPVVPDHVI 183
           I E+G + W+       + +GA TTS   ++  HV+
Sbjct: 62  IPEQGVVNWNK------IPEGANTTSTTKIIDGHVV 91


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 290 ISERGRIEWDAMQGSSIVNDGATTTSREPVVPDHVI 183
           I E+G + W+       + +GA TTS   ++  HV+
Sbjct: 110 IPEQGVVNWNK------IPEGANTTSTTKIIDGHVV 139


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 290 ISERGRIEWDAMQGSSIVNDGATTTSREPVVPDHVI 183
           I E+G + W+       + +GA TTS   ++  HV+
Sbjct: 110 IPEQGVVNWNK------IPEGANTTSTTKIIDGHVV 139


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 290 ISERGRIEWDAMQGSSIVNDGATTTSREPVVPDHVI 183
           I E+G + W+       + +GA TTS   ++  HV+
Sbjct: 110 IPEQGVVNWNK------IPEGANTTSTTKIIDGHVV 139


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 563 KYRASPGYTRHSVIKKRNSALTLD 634
           K+  +PGYT   VIK+       D
Sbjct: 213 KFYGTPGYTAPEVIKQNRPTPAAD 236


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 223 VAPSFTIEEPCIASHSILPRSLISKHQCAE 312
           + PSF+  E C  S + LP  +   HQ A+
Sbjct: 138 LGPSFSTGERCRISSNFLPNKM---HQVAK 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,593
Number of Sequences: 438
Number of extensions: 3970
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)