Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1851
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58089-1|AAC50546.1|  577|Homo sapiens Hs-CUL-3 protein.               31   3.0  
BC092409-1|AAH92409.1|  768|Homo sapiens cullin 3 protein.             31   3.0  
BC039598-1|AAH39598.1|  768|Homo sapiens cullin 3 protein.             31   3.0  
BC031844-1|AAH31844.1|  373|Homo sapiens CUL3 protein protein.         31   3.0  
AY337761-1|AAQ01660.1|  744|Homo sapiens cullin 3 isoform protein.     31   3.0  
AF064087-1|AAC36304.1|  768|Homo sapiens cullin 3 protein.             31   3.0  
AF062537-1|AAC36682.1|  768|Homo sapiens cullin 3 protein.             31   3.0  
AF052147-1|AAC28621.1|  343|Homo sapiens cul-3 protein.                31   3.0  
AC073052-1|AAX93287.1|  746|Homo sapiens unknown protein.              31   3.0  
AB014517-1|BAA31592.2|  786|Homo sapiens KIAA0617 protein protein.     31   3.0  

>U58089-1|AAC50546.1|  577|Homo sapiens Hs-CUL-3 protein.
          Length = 577

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 311 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 341


>BC092409-1|AAH92409.1|  768|Homo sapiens cullin 3 protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 502 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 532


>BC039598-1|AAH39598.1|  768|Homo sapiens cullin 3 protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 502 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 532


>BC031844-1|AAH31844.1|  373|Homo sapiens CUL3 protein protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 107 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 137


>AY337761-1|AAQ01660.1|  744|Homo sapiens cullin 3 isoform protein.
          Length = 744

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 478 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 508


>AF064087-1|AAC36304.1|  768|Homo sapiens cullin 3 protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 502 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 532


>AF062537-1|AAC36682.1|  768|Homo sapiens cullin 3 protein.
          Length = 768

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 502 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 532


>AF052147-1|AAC28621.1|  343|Homo sapiens cul-3 protein.
          Length = 343

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 77  DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 107


>AC073052-1|AAX93287.1|  746|Homo sapiens unknown protein.
          Length = 746

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 480 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 510


>AB014517-1|BAA31592.2|  786|Homo sapiens KIAA0617 protein protein.
          Length = 786

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 475 ELTAHLVLSGYWSP*TSTTYLNAPPTLRHKF 383
           +LT  ++ +GYW   ++T   N PP  RH F
Sbjct: 520 DLTVRVLTTGYWPTQSATPKCNIPPAPRHAF 550


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,409,514
Number of Sequences: 237096
Number of extensions: 1638049
Number of successful extensions: 2282
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2282
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)