Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1850
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.     24   5.7  
EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     24   5.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   7.5  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   10.0 

>EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 539 IFKYTKTANENIKTRL 586
           +FKYTK  N N+K  L
Sbjct: 31  VFKYTKGTNSNLKRDL 46


>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 539 IFKYTKTANENIKTRL 586
           +FKYTK  N N+K  L
Sbjct: 31  VFKYTKGTNSNLKRDL 46


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 318 ISYRYLQRKTLSLVVNYKIRKLLRELLYKIG 410
           ++ R L  K ++ VVNY + K + + +++IG
Sbjct: 482 VAARGLDIKNVNHVVNYDLPKSIDDYVHRIG 512


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 468 TNLTI*SKNDYLVIGPKIYHQFC 400
           TN+ + S+   L + P  YH FC
Sbjct: 140 TNVLVYSEGKVLWVPPTEYHAFC 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,279
Number of Sequences: 2352
Number of extensions: 14284
Number of successful extensions: 233
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)