Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1848
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.8  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 258 YGTSCRTALFDIESREPAPPHD 323
           +GT    + FD +S++  PP+D
Sbjct: 338 FGTPRIMSSFDFQSKDQGPPND 359


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 196 PDFVERFCDVEEESSRV*RFW 134
           PD   R  DV EE   + +FW
Sbjct: 199 PDLNYRNSDVREEMKNIMKFW 219


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 226 VE*FENQTVVPDFVERFCDVEEESSR 149
           VE +EN+  +P+  E F D+  +  R
Sbjct: 343 VEGWENRATIPELNEEFRDLRLQDLR 368


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 502  SPRTVVPKMAHRHQPSEKYCGALSEG 579
            S RT VP++A      E Y G  + G
Sbjct: 1336 SRRTPVPRLAQDSSEDESYRGPSASG 1361


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 568  LSEGKLHTDFLPY*EEESHTPDYSL*SIHTLGQEGQVPGRYPG 696
            L  G +    + Y E  S  P Y+  S+   G+EG    R  G
Sbjct: 1034 LRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTG 1076


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 568  LSEGKLHTDFLPY*EEESHTPDYSL*SIHTLGQEGQVPGRYPG 696
            L  G +    + Y E  S  P Y+  S+   G+EG    R  G
Sbjct: 1030 LRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTG 1072


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 15/47 (31%), Positives = 17/47 (36%)
 Frame = -3

Query: 270 KKSRMMSTRLSGTPMLNSLKIKPLCQTLSNVFATSKKRAPVYNGFGR 130
           K  R+ S R S T         PL      VFA      P +  FGR
Sbjct: 578 KLDRLDSLRGSTTDSQTEDNFGPLSNVRFAVFALGSSAYPNFCAFGR 624


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,874
Number of Sequences: 438
Number of extensions: 5053
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)