Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1843
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   8.4  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 573 YIQFDDFIMCAVRLKTMIDTFN 638
           YI+F+  + C  + KTM +  N
Sbjct: 113 YIRFNKLVKCFGKYKTMKEVLN 134


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 573 YIQFDDFIMCAVRLKTMIDTFN 638
           YI+F+  + C  + KTM +  N
Sbjct: 113 YIRFNKLVKCFGKYKTMKEVLN 134


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 378 GLGFEEFKSLWIDLRNWRAVFR 443
           GL FEE    +  L+NW   FR
Sbjct: 58  GLRFEEVSEKYGILQNWMDKFR 79


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 394 SSSPCGSTCATGGPCSA 444
           SS+P GS+C  G   +A
Sbjct: 148 SSAPTGSSCGPGAAAAA 164


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 473 DRPPPLHVVQAEHGPPVAQV 414
           D  PPLH  QAE    + Q+
Sbjct: 246 DIGPPLHADQAEEYKKIQQI 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,715
Number of Sequences: 438
Number of extensions: 3266
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)