Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1842
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.1  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    25   2.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   3.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   6.4  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 264 LKKKNEQLHFLKHHVFKSARTDVRVTRGTAEPLHG 160
           ++K+ E+L+ LKH V  +A  +   T G   P HG
Sbjct: 478 VRKRTERLN-LKHKVVDNASAEGGGTLGVQSPRHG 511


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 754 DVEPLRECSPAHSLYGHREAKAP 686
           +++P   CS AHS  G R+ K P
Sbjct: 619 ELDPNAPCSDAHSFCGLRDKKYP 641


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +3

Query: 81  PHSPYNVDFSNTG 119
           P+ P+NV++SNTG
Sbjct: 175 PNMPHNVNYSNTG 187


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 407 GPIRGLLPKRNRNTLPEFASDGRAIPPGTVL 499
           GP+ G  P  +R  LP     G A PP T+L
Sbjct: 601 GPLGG--PAGSRPPLPNLLGFGGAAPPVTIL 629


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 628 TSSGVTAPCLRFVTQRVVTQELWLLDVHKASGPDCIPAMVL 750
           T +G       F+   +V   L  L    A GPD IP+ VL
Sbjct: 529 TPAGAINMSTPFIDSEIVLSALAQLKPSFAPGPDGIPSTVL 569


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,885
Number of Sequences: 2352
Number of extensions: 21006
Number of successful extensions: 73
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)