Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1842
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.     30   2.3  
AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.     30   2.3  
AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.      30   2.3  
AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 580 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 626


>Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 595 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 641


>Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 580 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 626


>Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 595 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 641


>AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.
          Length = 957

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 580 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 626


>AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.
          Length = 972

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 595 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 641


>AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.
          Length = 972

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 290 KPVGTLHTSRGPSMQHGIMVTRCQDPSVSGEGRNLTPLLGPIRGLLPK 433
           K V T+H    P+ +  ++      P VS E +    + GP  G+LPK
Sbjct: 595 KKVYTMHKENDPTFRRTVLDFSI-GPCVSDEEKKRVSMFGPAEGILPK 641


>AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical
           protein C18E3.3 protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 22  SLQPKKLMISRQKEEFFQRVHIP 90
           SLQ K L IS QK + F++ H+P
Sbjct: 640 SLQFKPLKISNQKPDIFKQYHLP 662


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,957,382
Number of Sequences: 27780
Number of extensions: 454448
Number of successful extensions: 1001
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)