Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1837
(564 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 32 0.015
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 30 0.060
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 26 0.98
AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-li... 25 1.3
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 24 3.0
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 6.9
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 9.1
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 9.1
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 23 9.1
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 9.1
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 31.9 bits (69), Expect = 0.015
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 LGINVSSDVRFWSHLEGKANLASKMLRVLNRAKRYF-TPESRLLLYKEQVRPRVEYSSHL 442
LG+ + S + F H++ +++L V+ R F P +Y VR +EYS +
Sbjct: 847 LGVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVV 906
Query: 443 WAGVPKYQLLSFVSIQKRAVR 505
W+ + +IQ++ R
Sbjct: 907 WSPTTASSIARIEAIQRKLTR 927
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 29.9 bits (64), Expect = 0.060
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 266 LGINVSSDVRFWSHLEGKANLASKMLRVLNRAKRYFTPESRLL-LYKEQVRPRVEYSSHL 442
LGI + S + F L+ A++ L + R F +S L LY VRP +EY+S +
Sbjct: 776 LGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRNLYYALVRPLLEYASII 835
Query: 443 W 445
W
Sbjct: 836 W 836
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.8 bits (54), Expect = 0.98
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 322 GFTLQMTPKTHIARNVDPKYPNTLI*SRSLYDSSSP 215
GFTL T T RN DP+ R + DS+SP
Sbjct: 113 GFTLLQTASTPHNRNSDPRPATGRKRRRIIEDSASP 148
>AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-like
protein protein.
Length = 219
Score = 25.4 bits (53), Expect = 1.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 442 LGRGSEIPATFICLHTEEGRSDC 510
LGR ++ ++FIC E+GR C
Sbjct: 130 LGRRFKLHSSFICAGGEKGRDTC 152
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.2 bits (50), Expect = 3.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 290 VRFWSHLEGKANLASKMLRVLNRAKRYFTPESRLLL 397
VRF EGK + ++ + +Y TP+ RL++
Sbjct: 18 VRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIV 53
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.0 bits (47), Expect = 6.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 308 LEGKANLASKMLR---VLNRAKRYFTPESRLLL 397
L+ +A +AS + L R KRY TP+ R LL
Sbjct: 371 LQARATVASVFAQHDTELERIKRYSTPKVRRLL 403
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 93 LATKGSANKLTHRHSPSRFRS 31
L++ G A+ TH +PSR +S
Sbjct: 632 LSSSGGASSTTHSGAPSRSQS 652
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 22.6 bits (46), Expect = 9.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 20 NLPPDRKRDGLCLWVNLFAEPFV 88
+LP DR GL L V+ +EP V
Sbjct: 778 DLPNDRNETGLHLAVSCNSEPIV 800
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 22.6 bits (46), Expect = 9.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 386 LIQA*STASLY*GLSAFWTPNWLYPPNDSKNA 291
L+Q + + L L+ P W PP+D+ NA
Sbjct: 101 LVQGGTISFLVPTLAILNLPQWKCPPDDAINA 132
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 22.6 bits (46), Expect = 9.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 266 LGINVSSDVRFWSHLEGKANLASKMLRVLNRAKRYFTP 379
LG+ + ++F SHLE K+++ +N A FTP
Sbjct: 769 LGVVIDDRLKFKSHLE---EACKKVMKAIN-ALAAFTP 802
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,762
Number of Sequences: 2352
Number of extensions: 12145
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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