Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1837
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    37   0.022
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    37   0.022
AE014134-490|AAF51194.1|  375|Drosophila melanogaster CG3117-PA ...    35   0.066
U35631-2|AAB61476.1| 1186|Drosophila melanogaster MEI-218 protein.     32   0.62 
BT023750-1|AAZ41758.1| 1186|Drosophila melanogaster SD24912p pro...    32   0.62 
AY122070-1|AAM52582.1| 1186|Drosophila melanogaster AT14088p pro...    32   0.62 
AE014298-2524|AAF48699.1| 1186|Drosophila melanogaster CG8923-PC...    32   0.62 
AE014298-2523|AAN09433.2| 1186|Drosophila melanogaster CG8923-PB...    32   0.62 
AE014134-3552|AAF57241.2|  682|Drosophila melanogaster CG2528-PA...    25   8.7  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = +2

Query: 266 LGINVSSDVRFWSHLEGKAN---LASKMLRVLNRAKRYFTPESRLLLYKEQVRPRVEYSS 436
           LG+++   + +  H+E K+    L ++ L  L  A+   + E + LLY   ++P   Y S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798

Query: 437 HLWAGVPKYQLLSFVSIQKRAVRIV 511
            LW    +  +      Q R +RI+
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRII 823


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = +2

Query: 266 LGINVSSDVRFWSHLEGKAN---LASKMLRVLNRAKRYFTPESRLLLYKEQVRPRVEYSS 436
           LG+++   + +  H+E K+    L ++ L  L  A+   + E + LLY   ++P   Y S
Sbjct: 739 LGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGS 798

Query: 437 HLWAGVPKYQLLSFVSIQKRAVRIV 511
            LW    +  +      Q R +RI+
Sbjct: 799 ELWGNASRSNIDIIQRAQSRILRII 823


>AE014134-490|AAF51194.1|  375|Drosophila melanogaster CG3117-PA
           protein.
          Length = 375

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 406 ASPASRGVQLPPLGRGSEIPATFICLHTEEGRSDCG*FNSYASF 537
           +S   R ++L  +G   ++PA+ +C   EEGR  C  F  +A F
Sbjct: 272 SSKCQRQLRLTKMGSNYQLPASLMCAGGEEGRDVCSLFGGFALF 315


>U35631-2|AAB61476.1| 1186|Drosophila melanogaster MEI-218 protein.
          Length = 1186

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 374 TPESRLLLYKEQVRPRVEYSS---HLWAGVPKYQLLSFVSIQKRAVRIVDNSILTHRLER 544
           TPE  ++ Y++Q +PR   SS   H  + + K  + S ++   +       S LTH++ R
Sbjct: 497 TPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSNAKEFHPTGESHLTHKVSR 556

Query: 545 LGLRR 559
           L  RR
Sbjct: 557 LSQRR 561


>BT023750-1|AAZ41758.1| 1186|Drosophila melanogaster SD24912p
           protein.
          Length = 1186

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 374 TPESRLLLYKEQVRPRVEYSS---HLWAGVPKYQLLSFVSIQKRAVRIVDNSILTHRLER 544
           TPE  ++ Y++Q +PR   SS   H  + + K  + S ++   +       S LTH++ R
Sbjct: 497 TPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSNAKEFHPTGESHLTHKVSR 556

Query: 545 LGLRR 559
           L  RR
Sbjct: 557 LSQRR 561


>AY122070-1|AAM52582.1| 1186|Drosophila melanogaster AT14088p
           protein.
          Length = 1186

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 374 TPESRLLLYKEQVRPRVEYSS---HLWAGVPKYQLLSFVSIQKRAVRIVDNSILTHRLER 544
           TPE  ++ Y++Q +PR   SS   H  + + K  + S ++   +       S LTH++ R
Sbjct: 497 TPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSNAKEFHPTGESHLTHKVSR 556

Query: 545 LGLRR 559
           L  RR
Sbjct: 557 LSQRR 561


>AE014298-2524|AAF48699.1| 1186|Drosophila melanogaster CG8923-PC,
           isoform C protein.
          Length = 1186

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 374 TPESRLLLYKEQVRPRVEYSS---HLWAGVPKYQLLSFVSIQKRAVRIVDNSILTHRLER 544
           TPE  ++ Y++Q +PR   SS   H  + + K  + S ++   +       S LTH++ R
Sbjct: 497 TPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSNAKEFHPTGESHLTHKVSR 556

Query: 545 LGLRR 559
           L  RR
Sbjct: 557 LSQRR 561


>AE014298-2523|AAN09433.2| 1186|Drosophila melanogaster CG8923-PB,
           isoform B protein.
          Length = 1186

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 374 TPESRLLLYKEQVRPRVEYSS---HLWAGVPKYQLLSFVSIQKRAVRIVDNSILTHRLER 544
           TPE  ++ Y++Q +PR   SS   H  + + K  + S ++   +       S LTH++ R
Sbjct: 497 TPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAMGSVLNSNAKEFHPTGESHLTHKVSR 556

Query: 545 LGLRR 559
           L  RR
Sbjct: 557 LSQRR 561


>AE014134-3552|AAF57241.2|  682|Drosophila melanogaster CG2528-PA
           protein.
          Length = 682

 Score = 25.4 bits (53), Expect(2) = 8.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 352 EDSQHFGRQIGFTLQMTPKTHIARNVDPKYPNTLI*SRSLYDSSSPI 212
           ++  HF   I F+       HI  N + +YP+TLI +    D  SP+
Sbjct: 623 DEKVHFANLIKFS--PLHNVHIPLNPNQEYPSTLILTADHDDRVSPL 667



 Score = 21.0 bits (42), Expect(2) = 8.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 454 NPGPKVGAVLHARPDL 407
           N G  VGA ++ RPDL
Sbjct: 575 NGGLLVGACINQRPDL 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,837,230
Number of Sequences: 53049
Number of extensions: 605254
Number of successful extensions: 1303
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)