Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1836
(794 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 172 4e-43
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 172 4e-43
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 150 2e-36
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 149 4e-36
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 148 1e-35
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 148 1e-35
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 146 3e-35
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 144 2e-34
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 135 8e-32
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 105 7e-23
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 105 7e-23
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 105 7e-23
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 105 7e-23
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 101 1e-21
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 97 2e-20
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 97 2e-20
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 97 2e-20
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 97 2e-20
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 74 3e-13
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 63 4e-10
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 52 7e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 8e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 44 3e-04
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 42 0.001
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 40 0.003
AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-P... 32 1.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 172 bits (419), Expect = 4e-43
Identities = 89/258 (34%), Positives = 142/258 (55%)
Frame = +2
Query: 8 AFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXX 187
AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 613 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 672
Query: 188 XXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIN 367
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I
Sbjct: 673 GPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIK 732
Query: 368 INPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRP 547
INP K+ A+ F L P I W ++YLG+ D +TF+
Sbjct: 733 INPNKTNAIFFTKRRKPRYLPDRQLRILDSP-------IQWVDNIRYLGIIFDKKLTFKY 785
Query: 548 HIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDT 727
HI + + I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI
Sbjct: 786 HINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKK 845
Query: 728 LQSLQSRFCRLAVGAPWF 781
LQ Q++ +L + P++
Sbjct: 846 LQICQNKLLKLIMNLPYY 863
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 172 bits (419), Expect = 4e-43
Identities = 89/258 (34%), Positives = 142/258 (55%)
Frame = +2
Query: 8 AFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXX 187
AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 561 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 620
Query: 188 XXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIN 367
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I
Sbjct: 621 GPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIK 680
Query: 368 INPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRP 547
INP K+ A+ F L P I W ++YLG+ D +TF+
Sbjct: 681 INPNKTNAIFFTKRRKPRYLPDRQLRILDSP-------IQWVDNIRYLGIIFDKKLTFKY 733
Query: 548 HIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDT 727
HI + + I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI
Sbjct: 734 HINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKK 793
Query: 728 LQSLQSRFCRLAVGAPWF 781
LQ Q++ +L + P++
Sbjct: 794 LQICQNKLLKLIMNLPYY 811
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 150 bits (363), Expect = 2e-36
Identities = 85/263 (32%), Positives = 137/263 (52%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
++AFDKVW +GL+FK+ + +P+S +++ +L +R F R S+ + AGVPQG
Sbjct: 584 SQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGS 642
Query: 182 XXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 361
DIP + ++ FADDT + SR+ +L + + +W WR
Sbjct: 643 VLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWR 702
Query: 362 ININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTF 541
I +N K V F PP+ L S +P A +V YLGV LD +T+
Sbjct: 703 IKVNEQKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTW 751
Query: 542 RPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHI 721
R HI++ + + L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++I
Sbjct: 752 RRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNI 811
Query: 722 DTLQSLQSRFCRLAVGAPWFVRN 790
D +Q QS+ R GAPW+VR+
Sbjct: 812 DIIQRAQSKILRTITGAPWYVRS 834
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 149 bits (361), Expect = 4e-36
Identities = 87/267 (32%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
+AFD+VWH GL K+ +P +++ +L R F R S+ + AGVPQG
Sbjct: 587 EAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSV 645
Query: 185 XXXXXXXXXXNDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWF 349
+D+P+ + LA FADD V Y SR + A +Q A +W
Sbjct: 646 LGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWA 705
Query: 350 RKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDA 529
R+W I IN +KS V F PP+ + +P KYLGV LD
Sbjct: 706 RRWNIGINSSKSNNVCFTLKR-----------RTPPPVYIEEVPVPQPNAAKYLGVLLDR 754
Query: 530 SMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 709
+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y ++ A
Sbjct: 755 RLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLAC 814
Query: 710 RTHIDTLQSLQSRFCRLAVGAPWFVRN 790
+HI +Q++Q++ RL G WFVRN
Sbjct: 815 DSHIKRIQAIQNKVARLITGCEWFVRN 841
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 148 bits (358), Expect = 1e-35
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 8/269 (2%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
+AFD+VWH GL++K + P L L+++ FL R+F V+G +SS +P+ AGVPQG
Sbjct: 589 QAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSV 647
Query: 185 XXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALG 340
+D+P P +A +ADDT V S++ LQ A
Sbjct: 648 LGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQ 707
Query: 341 QWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 520
QW W + IN K V F P ++L + I + KYLG+T
Sbjct: 708 QWAENWNVRINAEKCANVTF-----------ANRTGSCPGVSLNGRLIRHHQAYKYLGIT 756
Query: 521 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 700
LD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P + Y V+
Sbjct: 757 LDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYG 816
Query: 701 HAARTHIDTLQSLQSRFCRLAVGAPWFVR 787
AA++H++ ++ LQ++ R GAPW++R
Sbjct: 817 IAAKSHLNKIRILQAKTLRRISGAPWYMR 845
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 148 bits (358), Expect = 1e-35
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 8/269 (2%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
+AFD+VWH GL++K + P L L+++ FL R+F V+G +SS +P+ AGVPQG
Sbjct: 391 QAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSV 449
Query: 185 XXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALG 340
+D+P P +A +ADDT V S++ LQ A
Sbjct: 450 LGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQ 509
Query: 341 QWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 520
QW W + IN K V F P ++L + I + KYLG+T
Sbjct: 510 QWAENWNVRINAEKCANVTF-----------ANRTGSCPGVSLNGRLIRHHQAYKYLGIT 558
Query: 521 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 700
LD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P + Y V+
Sbjct: 559 LDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYG 618
Query: 701 HAARTHIDTLQSLQSRFCRLAVGAPWFVR 787
AA++H++ ++ LQ++ R GAPW++R
Sbjct: 619 IAAKSHLNKIRILQAKTLRRISGAPWYMR 647
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 146 bits (354), Expect = 3e-35
Identities = 86/263 (32%), Positives = 132/263 (50%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
A+AFD+VW +GL+FK+ + +P + +++ +L NR F R + + S + AGVPQG
Sbjct: 582 AQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGS 640
Query: 182 XXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 361
D P + FADDT + S+ L ++ +W WR
Sbjct: 641 VLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWR 700
Query: 362 ININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTF 541
I+IN K V F PP+ L + IP A +V YLGV LD +T+
Sbjct: 701 ISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTW 749
Query: 542 RPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHI 721
R HI++ L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++I
Sbjct: 750 RKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNI 809
Query: 722 DTLQSLQSRFCRLAVGAPWFVRN 790
D +Q QSR R+ GAPW++RN
Sbjct: 810 DIIQRAQSRILRIITGAPWYLRN 832
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 144 bits (348), Expect = 2e-34
Identities = 85/263 (32%), Positives = 131/263 (49%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
A+AFD+VW +GL+FK+ + +P + +++ +L N F R + + S + AGVPQG
Sbjct: 582 AQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGS 640
Query: 182 XXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 361
D P + FADDT + S+ L ++ +W WR
Sbjct: 641 VLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWR 700
Query: 362 ININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTF 541
I+IN K V F PP+ L + IP A +V YLGV LD +T+
Sbjct: 701 ISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTW 749
Query: 542 RPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHI 721
R HI++ L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++I
Sbjct: 750 RKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNI 809
Query: 722 DTLQSLQSRFCRLAVGAPWFVRN 790
D +Q QSR R+ GAPW++RN
Sbjct: 810 DIIQRAQSRILRIITGAPWYLRN 832
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 135 bits (326), Expect = 8e-32
Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 8/269 (2%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
+AFD+VWH+GLI K+ + P +++ +L +R F RV + S PR + AGVPQG
Sbjct: 588 QAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSV 646
Query: 185 XXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALG 340
D+P H LA +ADD + YSS + A+ LQ L
Sbjct: 647 LGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLA 706
Query: 341 QWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 520
W ++W + +NP K+ F +T PI L + + KYLG+T
Sbjct: 707 AWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEGVILDQPSQAKYLGIT 757
Query: 521 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 700
LD +TF PH+K+ R + +L ++ ++S M+LR K +Y C+ P+ Y ++
Sbjct: 758 LDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWG 817
Query: 701 HAARTHIDTLQSLQSRFCRLAVGAPWFVR 787
AA+++ + +Q LQ+R R P++VR
Sbjct: 818 IAAKSNYNRIQVLQNRAMRAITDCPYYVR 846
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 105 bits (252), Expect = 7e-23
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 18/279 (6%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 181
+AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 188 EAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGS 246
Query: 182 XXXXXXXXXXXNDIPRS-----------PPTH-----LALFADDTTVYYSSRNKSLIAKK 313
+D+P P H LA +ADDT + S+ L
Sbjct: 247 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 306
Query: 314 LQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWA 493
Q+ +W +KW I IN K+ +LF TPP+ + Q
Sbjct: 307 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKL 358
Query: 494 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 673
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 359 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 418
Query: 674 MTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVR 787
YA ++ + T +Q++++++ R + A + R
Sbjct: 419 WHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTR 457
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 105 bits (252), Expect = 7e-23
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 18/279 (6%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 181
+AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 635 EAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGS 693
Query: 182 XXXXXXXXXXXNDIPRS-----------PPTH-----LALFADDTTVYYSSRNKSLIAKK 313
+D+P P H LA +ADDT + S+ L
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 314 LQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWA 493
Q+ +W +KW I IN K+ +LF TPP+ + Q
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKL 805
Query: 494 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 673
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
Query: 674 MTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVR 787
YA ++ + T +Q++++++ R + A + R
Sbjct: 866 WHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 105 bits (252), Expect = 7e-23
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 18/279 (6%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 181
+AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 635 EAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGS 693
Query: 182 XXXXXXXXXXXNDIPRS-----------PPTH-----LALFADDTTVYYSSRNKSLIAKK 313
+D+P P H LA +ADDT + S+ L
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 314 LQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWA 493
Q+ +W +KW I IN K+ +LF TPP+ + Q
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKL 805
Query: 494 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 673
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
Query: 674 MTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVR 787
YA ++ + T +Q++++++ R + A + R
Sbjct: 866 WHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 105 bits (252), Expect = 7e-23
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 18/279 (6%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 181
+AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G T S + AGVPQG
Sbjct: 635 EAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGS 693
Query: 182 XXXXXXXXXXXNDIPRS-----------PPTH-----LALFADDTTVYYSSRNKSLIAKK 313
+D+P P H LA +ADDT + S+ L
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 314 LQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWA 493
Q+ +W +KW I IN K+ +LF TPP+ + Q
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKL 805
Query: 494 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 673
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
Query: 674 MTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVR 787
YA ++ + T +Q++++++ R + A + R
Sbjct: 866 WHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 101 bits (241), Expect = 1e-21
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 643 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQG 701
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P R PT L+ +ADDT V S + + ++
Sbjct: 702 SNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKT 761
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V+F + + Q+I K YLG
Sbjct: 762 FSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLG 813
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
VTLD+ +T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 814 VTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 97.1 bits (231), Expect = 2e-20
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 631 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQG 689
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P R PT L+ +ADDT V S + + ++ +
Sbjct: 690 SNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKS 749
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V+F + + Q I K YLG
Sbjct: 750 FSDWADKWGISVNAAKTGHVIFTLKNDLPTSLR--------TMKIKGQVIKIESKQSYLG 801
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T H+ + + ++ ++ +RSK+ + K+ + K+ + P+ YA
Sbjct: 802 VILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 515 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQG 573
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P PT L+ +ADDT V S + + ++
Sbjct: 574 SNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKT 633
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V++ NL + + Q+I K YLG
Sbjct: 634 FSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLG 685
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+ YA
Sbjct: 686 VILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 631 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQG 689
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P PT L+ +ADDT V S + + ++
Sbjct: 690 SNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKT 749
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V++ NL + + Q+I K YLG
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLG 801
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+ YA
Sbjct: 802 VILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 631 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQG 689
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P PT L+ +ADDT V S + + ++
Sbjct: 690 SNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKT 749
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V++ NL + + Q+I K YLG
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLG 801
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+ YA
Sbjct: 802 VILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 593 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQG 651
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P PT L+ +ADDT V S + + ++
Sbjct: 652 SNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKT 711
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V++ NL + + Q+I K YLG
Sbjct: 712 FSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLG 763
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+ YA
Sbjct: 764 VILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 178
++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 631 SEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQG 689
Query: 179 XXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALA 334
+D+P PT L+ +ADDT V S + + ++
Sbjct: 690 SNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKT 749
Query: 335 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 514
W KW I++N AK+ V++ NL + + Q+I K YLG
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLG 801
Query: 515 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 685
V LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+ YA
Sbjct: 802 VILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 73.7 bits (173), Expect = 3e-13
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
+AFD+V + ++ +L G+ L +I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 587 RAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSP 646
Query: 185 XXXXXXXXXXNDI----PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 352
DI R +++L+ADD ++ +N + + +K + W
Sbjct: 647 LSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINSW-- 704
Query: 353 KWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDAS 532
A S A L NL+ I S++I +K LG+T D
Sbjct: 705 -------GATSGASLAIEKCQTLHICRKQRCNLS-DIVFNSRTIKDVNFLKILGITFDPK 756
Query: 533 MTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 712
+ F+ H +++R + + + K S + ++ + + + + + Y +F A+
Sbjct: 757 LLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAK 816
Query: 713 THIDTLQ 733
+H+ LQ
Sbjct: 817 SHLKKLQ 823
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 63.3 bits (147), Expect = 4e-10
Identities = 33/96 (34%), Positives = 51/96 (53%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
A+AFD+VW +GL+FK+ + +P ++ +++ +L R F R + SS + AGVPQG
Sbjct: 123 AQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGS 181
Query: 182 XXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR 289
DIP + + FADDT + SR
Sbjct: 182 VLGPILYTLYTADIPTNYQLTIFTFADDTAIISRSR 217
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 52.4 bits (120), Expect = 7e-07
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Frame = +2
Query: 8 AFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXX 187
AFD V + + +L ++G + + + + F S R R + + P+T G PQG
Sbjct: 582 AFDNVEWSAALSRLADLGCRE--MGLWQSFFSGRRAVIR-SSSGTVEVPVTRGCPQGSIS 638
Query: 188 XXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 361
+ + + P L+ +ADD + +++++ +K + W +
Sbjct: 639 GPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVETWGAEVG 698
Query: 362 ININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTF 541
++ +K+ +L + P + +++P+ R +YLG+T+ M F
Sbjct: 699 DCLSTSKTVIMLLKGALRR-----------APTVRFAGRNLPYVRSCRYLGITVSEGMKF 747
Query: 542 RPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 709
HI S+R R ++G L ++ S R + T+Y + P + + + V+ A
Sbjct: 748 LTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 48.8 bits (111), Expect = 8e-06
Identities = 52/261 (19%), Positives = 104/261 (39%), Gaps = 4/261 (1%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
++AFD+V + +I +L ++ I++F+SNR RV SSP PL G+PQG
Sbjct: 578 SRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGS 637
Query: 182 XXXXXXXXXXXNDIPRSPPTHLAL----FADDTTVYYSSRNKSLIAKKLQSAALALGQWF 349
N + H + +ADD + + + L + + W
Sbjct: 638 PISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFDDIENWC 697
Query: 350 RKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDA 529
+++ +K + + T I+ + IP +K LG+TL+
Sbjct: 698 SYSGASLSLSKCQHL-----------HICRKRHCTCKISCNNFQIPSVTSLKILGITLNN 746
Query: 530 SMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 709
+ HI + + L + + + + + + K I + Y ++ HA
Sbjct: 747 KYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAP 806
Query: 710 RTHIDTLQSLQSRFCRLAVGA 772
++ ++ +++ + RLA+GA
Sbjct: 807 KSILNKIKTPFNSAIRLALGA 827
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 43.6 bits (98), Expect = 3e-04
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 7/192 (3%)
Frame = +2
Query: 53 NMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXN---D 220
N+GVPD + +I ++ +R Y E G RS ++AGVPQG +
Sbjct: 576 NLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILS 633
Query: 221 IPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAVLF 400
I + L FADD + ++ + A A +W K + I K+ VL
Sbjct: 634 ISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLL 693
Query: 401 QXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF 580
+ + I A +KYLGV +D ++F+ H + +AA
Sbjct: 694 SSRKSVECMR----------VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAM 743
Query: 581 ---ILGRLYPMI 607
L R+ P +
Sbjct: 744 TAAALARIMPNV 755
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 41.9 bits (94), Expect = 0.001
Identities = 43/182 (23%), Positives = 66/182 (36%), Gaps = 4/182 (2%)
Frame = +2
Query: 41 FKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPR-PLTAGVPQGXXXXXXXXXXXXN 217
F N P LV IR + SNR E + R +T GVPQG +
Sbjct: 10 FNTANFSDPAYLVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMYD 67
Query: 218 DIPRSP---PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKST 388
I R P + + FADD + + + A+ W + + P K+
Sbjct: 68 GILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTK 127
Query: 389 AVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRD 568
AVL T + + + +R +KYL V +D ++FR H+
Sbjct: 128 AVLISSRKAVE----------TATVEVGGTLVSSSRAIKYLEVMIDTRLSFREHLAYASS 177
Query: 569 RA 574
+A
Sbjct: 178 KA 179
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 476 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 655
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 656 TCIRPVMTYA 685
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-PA
protein.
Length = 558
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 652 QNLHKARHDLRECGVRSRGPHTHRHP 729
Q LH ++H LRE R G H HR P
Sbjct: 18 QILHGSKHSLRELAYRQSGKHRHRGP 43
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,875,628
Number of Sequences: 53049
Number of extensions: 966344
Number of successful extensions: 2846
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2803
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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