Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1836
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 39 0.005
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.033
Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 30 2.2
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 30 2.2
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 29 2.9
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 29 2.9
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 29 2.9
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 29 2.9
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 29 5.1
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 93.1 bits (221), Expect = 2e-19
Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Frame = +2
Query: 2 AKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 181
+KAFD++ H+ L+ KL ++ +L++ + +FLSNRSFR R+ T SS + T GVPQG
Sbjct: 22 SKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGA 81
Query: 182 XXXXXXXXXXXNDIPRSPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRK 355
NDI P +A FADDT + Y+S K+ LQSA A+ W +
Sbjct: 82 VLSPLLFGIYVNDISSILPEKVACKQFADDTKL-YASTPKTESENNLQSALDAVVDWTKG 140
Query: 356 WRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASM 535
++ +N +K+ V + L I + LG + +
Sbjct: 141 SKLTLNQSKTVHV------------TVGKRRIDFKYHLDGYPIERKAITRDLGFLISEKL 188
Query: 536 TFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAART 715
F H + + A F L ++ K S + + + LYKT IRP + Y +VV + ++
Sbjct: 189 DFSDHWRKCINLAKFQLANMFN---KYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKS 245
Query: 716 HIDTLQSLQSRFCR 757
T++S+Q+ F R
Sbjct: 246 DEKTIESVQNAFTR 259
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 1/183 (0%)
Frame = +2
Query: 8 AFDKVWHNGLIFKLFN-MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXX 184
AFDKV L L G+ + L + ++L R R + S L GVPQG
Sbjct: 479 AFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSV 538
Query: 185 XXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRI 364
D+P T L +ADD ++ + A+K+Q + ++ ++ +
Sbjct: 539 ISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGM 598
Query: 365 NINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFR 544
+I+ KST +F P I IP K LG+TL+ +
Sbjct: 599 SISAEKSTVTVFS--------CDPKEHKTKPDIYWMDDPIPVINAPKLLGITLNTMTGTK 650
Query: 545 PHI 553
H+
Sbjct: 651 DHV 653
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 50.0 bits (114), Expect = 2e-06
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Frame = +2
Query: 44 KLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRS-SPRPLTAGVPQGXXXXXXXXXXXXND 220
KL G+ ++FL NR+F ++ S + P+++GVPQG N+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 221 --IPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAV 394
I +P +++ FADD ++++ + ++I Q++ + W + + + P KS A+
Sbjct: 899 LLIDLAPTINISCFADDVKIFHT--DPTII----QNSIDIIVSWSKLNELPLAPTKS-AL 951
Query: 395 LFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 574
L +TP T V+ LG+ D + F HI V +
Sbjct: 952 LALGTRNKNQSYSVDGVPITPSST-----------VRDLGLITDCKLKFEHHIVKV---S 997
Query: 575 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 700
+ R ++ S S + LYKT + P+M Y S V+A
Sbjct: 998 CLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +2
Query: 5 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 181
KAFD+V H+ L+ KL + G+ DFLS+R+F +V + P+++GVP+G
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 182 XXXXXXXXXXXNDIPRSPPTHL--ALFADDTTVYYSS 286
N + S P + + FADD VY S
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVYSHS 98
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 509 LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYAS 688
LG+ D+ +TF+PHIK + + L R ++ + L+KT I P++ Y S
Sbjct: 198 LGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGS 254
Query: 689 VVFAHAARTHIDTL 730
V++ + + TL
Sbjct: 255 AVYSPKPSSSLSTL 268
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 509 LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYAS 688
LG + + F H K + A F L ++ +K + + LYKT IRP + Y +
Sbjct: 150 LGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKTFIRPRLEYGT 206
Query: 689 VVFAHAARTHIDTLQSLQSRFCR 757
VV + ++ ++S+Q+ F R
Sbjct: 207 VVSSPTKKSDEKAIESVQNAFTR 229
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3
Query: 222 ISLTNKLNRRGERTEPCGTPAVRGRGEER 136
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical
protein R05A10.3 protein.
Length = 387
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +1
Query: 295 VPNREEASERSPSPRTVVPKMAHKHQPSEKYCGALSEGKLHTDFLPY*EEESHTPDYSL* 474
+ N E P+ +PK K +P + G+ S+ TD Y + DY
Sbjct: 127 INNMETGVPEGPTKEPYMPKPITKPKPGQNNSGSFSDSTDFTDSSDYTRYTDGSTDYPGG 186
Query: 475 SIHTLG--QEGQVPGRYPGCIDDIPPAY 552
S G + + G I+ IPP Y
Sbjct: 187 STDVPGGSTDSPIDGSTDLPIESIPPVY 214
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -3
Query: 252 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 76
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 75 RLSGTPMLNSLKIKPLCQTLSNA 7
+L+G + K + + T SNA
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNA 512
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -3
Query: 252 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 76
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 75 RLSGTPMLNSLKIKPLCQTLSNA 7
+L+G + K + + T SNA
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNA 512
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -3
Query: 252 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 76
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 75 RLSGTPMLNSLKIKPLCQTLSNA 7
+L+G + K + + T SNA
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNA 512
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -3
Query: 252 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 76
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 75 RLSGTPMLNSLKIKPLCQTLSNA 7
+L+G + K + + T SNA
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNA 512
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 460 RGCEIPPPNTGGNPC 416
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 460 RGCEIPPPNTGGNPC 416
R C +PPP GG PC
Sbjct: 324 RACTVPPPMNGGQPC 338
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 460 RGCEIPPPNTGGNPC 416
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 460 RGCEIPPPNTGGNPC 416
R C +PPP GG PC
Sbjct: 296 RACTVPPPMNGGQPC 310
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 569 RAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 748
RA + M+C+R SL++++ K C R M Y + + + +T D + S SR
Sbjct: 37 RAVMRSAKSQDMVCERESCSLKDRIQCCKIC-RLKMCYDAGMDPNKFQTGRDLISS-SSR 94
Query: 749 FCRL-AVGAPWFVRN 790
L +VG+P + N
Sbjct: 95 SSNLSSVGSPQSLAN 109
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 56 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 160
+ +PD ++I R+ R V GT+SSP PLT
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLT 439
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,676,715
Number of Sequences: 27780
Number of extensions: 459151
Number of successful extensions: 1210
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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