Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1832
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 143 1e-34
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 143 1e-34
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 140 8e-34
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 108 4e-24
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 108 4e-24
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 56 2e-08
Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical pr... 32 0.41
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 321 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 380
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 381 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 439
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 440 YGAEVILRKRLEMYISQKQ 458
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 361 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 420
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 421 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 479
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 480 YGAEVILRKRLEMYISQKQ 498
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 422 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 481
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 482 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 540
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 541 YGAEVILRKRLEMYISQKQ 559
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 321 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 380
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 381 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 439
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 440 YGAEVILRKRLEMYISQKQ 458
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 361 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 420
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 421 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 479
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 480 YGAEVILRKRLEMYISQKQ 498
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 143 bits (347), Expect = 1e-34
Identities = 65/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NFDLQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 422 IITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 481
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 482 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 540
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 541 YGAEVILRKRLEMYISQKQ 559
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 140 bits (340), Expect = 8e-34
Identities = 64/139 (46%), Positives = 93/139 (66%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+IT+ GG +NF LQP TTGAWI T G +TGV + V AL+ +S +
Sbjct: 361 IITVHGGTSNFXLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHVAAALEGAQSAQ 420
Query: 181 AGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVGR 360
++V IGIAPWG+++ + IG+ + VPY+ +S + + LNNRH+YFLLVDNG+VGR
Sbjct: 421 RNKIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGR 479
Query: 361 YGAEIVLRRKLEKYIAAQK 417
YGAE++LR++LE YI+ ++
Sbjct: 480 YGAEVILRKRLEMYISQKQ 498
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 112 bits (270), Expect = 2e-25
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLE--RS 174
+IT+ GG +NF+L+ TTGAWI T G ++GV R V AL +
Sbjct: 200 VITVHGGMSNFELEERLGRLFRKGMLKAAQTTGAWIITSGLDSGVVRHVAKALDEAGISA 259
Query: 175 QRAGRVVSIGIAPWGIVEGANELIGKGRDVPY--HAIASPRSKLAVLNNRHAYFLLVDNG 348
+ ++V+IGIAPWG+++ LI + V Y H++ S + + +LN+RH+YFLL DNG
Sbjct: 260 RMRSQIVTIGIAPWGVIKRKERLIRQNEHVYYDVHSL-SVNANVGILNDRHSYFLLADNG 318
Query: 349 SVGRYGAEIVLRRKLEKYIA 408
+VGR+GA++ LR+ LE +IA
Sbjct: 319 TVGRFGADLHLRQNLENHIA 338
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical
protein C05C12.3 protein.
Length = 1694
Score = 108 bits (260), Expect = 4e-24
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+ITI GG FDLQP +T AWI T G + GV + + AL +
Sbjct: 238 IITINGGLTKFDLQPKLARTFRKGIMKIAKSTDAWIITSGLDEGVVKHLDSALHDHGNHT 297
Query: 181 A-GRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVG 357
+ VV+IGIA WG+++ + +GK V Y ++L LN+ H+YFL DNG+V
Sbjct: 298 SKNHVVAIGIASWGMLKQRSRFVGKDSTVTYATNVFNNTRLKELNDNHSYFLFSDNGTVN 357
Query: 358 RYGAEIVLRRKLEKYIA 408
RYGAEI++R++LE Y+A
Sbjct: 358 RYGAEIIMRKRLEAYLA 374
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 108 bits (260), Expect = 4e-24
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+ITI GG FDLQP +T AWI T G + GV + + AL +
Sbjct: 238 IITINGGLTKFDLQPKLARTFRKGIMKIAKSTDAWIITSGLDEGVVKHLDSALHDHGNHT 297
Query: 181 A-GRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVG 357
+ VV+IGIA WG+++ + +GK V Y ++L LN+ H+YFL DNG+V
Sbjct: 298 SKNHVVAIGIASWGMLKQRSRFVGKDSTVTYATNVFNNTRLKELNDNHSYFLFSDNGTVN 357
Query: 358 RYGAEIVLRRKLEKYIA 408
RYGAEI++R++LE Y+A
Sbjct: 358 RYGAEIIMRKRLEAYLA 374
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 108 bits (260), Expect = 4e-24
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 LITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIFTGGTNTGVTRQVGDALQLERSQR 180
+ITI GG FDLQP +T AWI T G + GV + + AL +
Sbjct: 225 IITINGGLTKFDLQPKLARTFRKGIMKIAKSTDAWIITSGLDEGVVKHLDSALHDHGNHT 284
Query: 181 A-GRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRSKLAVLNNRHAYFLLVDNGSVG 357
+ VV+IGIA WG+++ + +GK V Y ++L LN+ H+YFL DNG+V
Sbjct: 285 SKNHVVAIGIASWGMLKQRSRFVGKDSTVTYATNVFNNTRLKELNDNHSYFLFSDNGTVN 344
Query: 358 RYGAEIVLRRKLEKYIA 408
RYGAEI++R++LE Y+A
Sbjct: 345 RYGAEIIMRKRLEAYLA 361
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +1
Query: 283 SPRSKLAVLNNRHAYFLLVDNGSVGRYGAEIVLRRKLEKYIA 408
S + + +LN+RH+YFLL DNG+VGR+GA++ LR+ LE +IA
Sbjct: 13 SVNANVGILNDRHSYFLLADNGTVGRFGADLHLRQNLENHIA 54
>Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical
protein T27F6.2 protein.
Length = 421
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -3
Query: 362 YLPTDPLSTSKKYACLLFSTASFDLGEAIAW*GT--SRPFPMSSLAPSTIPHGAIPMLTT 189
Y DP+ T++ CL ST +F A W T + P + + A P T
Sbjct: 240 YNNIDPVQTNRVDYCLTMSTTNFGSSPAGFWFSTNCNNPGYYICKRQAGVQCSAAPPATV 299
Query: 188 RPARWDLSNCNA 153
P+ + SNCNA
Sbjct: 300 TPSPANPSNCNA 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,140,011
Number of Sequences: 27780
Number of extensions: 414915
Number of successful extensions: 1029
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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