Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1832
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 247 GKGRDVPYHAIASPRSKLAVLNNRH 321
           G GR+V Y    +  + + VLNN H
Sbjct: 150 GVGRNVGYKIPITKLTAMGVLNNLH 174


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 247 GKGRDVPYHAIASPRSKLAVLNNRH 321
           G GR+V Y    +  + + VLNN H
Sbjct: 150 GVGRNVGYKIPITKLTAMGVLNNLH 174


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 368 APYLPTDPLSTSKKYACLLFSTAS 297
           APY P  PLS SK    +    AS
Sbjct: 95  APYPPNHPLSGSKHLCSICGDRAS 118


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 247 GKGRDVPYHAIASPRSKLAVLNNRH 321
           G GR+V Y    +  + + VLNN H
Sbjct: 150 GVGRNVGYKIPITKLTAMGVLNNLH 174


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 163 LERSQRAGRVVSIGIAPWG 219
           L ++ R  R+V+IGI  WG
Sbjct: 354 LWQNPRTKRLVNIGIISWG 372


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 368 APYLPTDPLSTSKKYACLLFSTAS 297
           APY P  PLS SK    +    AS
Sbjct: 95  APYPPNHPLSGSKHLCSICGDRAS 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,805
Number of Sequences: 438
Number of extensions: 5034
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)