Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1829
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p pro...   306   2e-83
AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine...   306   2e-83
AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA ...   306   2e-83
AY095190-1|AAM12283.1|  283|Drosophila melanogaster LD31229p pro...    51   2e-06
AE014297-926|AAF54370.1|  283|Drosophila melanogaster CG8132-PA ...    51   2e-06
AE014296-1812|AAF50160.2|  343|Drosophila melanogaster CG6559-PA...    29   7.2  
AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-P...    29   7.2  
AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-P...    29   7.2  

>BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p
           protein.
          Length = 408

 Score =  306 bits (752), Expect = 2e-83
 Identities = 139/246 (56%), Positives = 174/246 (70%)
 Frame = +2

Query: 50  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 229
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 27  ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 86

Query: 230 EQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 409
           EQTR  RIV+VG +Q+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 87  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 146

Query: 410 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVV 589
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILERD +H + +WNTAVV
Sbjct: 147 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 206

Query: 590 ISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWM 769
           IS++G  +GKHRKNHIPRVGDFNES YYMEGNTGHPVF T +GK+AVNIC+GRHH  NWM
Sbjct: 207 ISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWM 266

Query: 770 MFGQNG 787
           MFG NG
Sbjct: 267 MFGLNG 272


>AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine
           synthase protein.
          Length = 386

 Score =  306 bits (752), Expect = 2e-83
 Identities = 139/246 (56%), Positives = 174/246 (70%)
 Frame = +2

Query: 50  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 229
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 5   ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64

Query: 230 EQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 409
           EQTR  RIV+VG +Q+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 65  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124

Query: 410 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVV 589
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILERD +H + +WNTAVV
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 184

Query: 590 ISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWM 769
           IS++G  +GKHRKNHIPRVGDFNES YYMEGNTGHPVF T +GK+AVNIC+GRHH  NWM
Sbjct: 185 ISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWM 244

Query: 770 MFGQNG 787
           MFG NG
Sbjct: 245 MFGLNG 250


>AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA
           protein.
          Length = 386

 Score =  306 bits (752), Expect = 2e-83
 Identities = 139/246 (56%), Positives = 174/246 (70%)
 Frame = +2

Query: 50  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 229
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 5   ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64

Query: 230 EQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 409
           EQTR  RIV+VG +Q+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 65  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124

Query: 410 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVV 589
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILERD +H + +WNTAVV
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 184

Query: 590 ISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWM 769
           IS++G  +GKHRKNHIPRVGDFNES YYMEGNTGHPVF T +GK+AVNIC+GRHH  NWM
Sbjct: 185 ISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWM 244

Query: 770 MFGQNG 787
           MFG NG
Sbjct: 245 MFGLNG 250


>AY095190-1|AAM12283.1|  283|Drosophila melanogaster LD31229p
           protein.
          Length = 283

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
 Frame = +2

Query: 332 NKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIK 511
           N V KI     +    +I   E +N P+       + + E++E+  DG T+  L  LA K
Sbjct: 27  NAVTKIEAAVKEHKPRLITLPECFNAPYG-----TKYFREYSETIPDGYTSQQLSNLARK 81

Query: 512 YAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVG-----DFNESNYYM 676
           + + IV   +  +   +D ++NT  V S TG+++ KHRK H+  +       F ES    
Sbjct: 82  HQVYIVGGTIP-ELGENDAIYNTCTVWSPTGDLVAKHRKMHLFDIDVKGGIRFKESETLS 140

Query: 677 EGNTGHPVFATRYGKIAVNICF 742
            GN    +      KI + IC+
Sbjct: 141 AGN-DFTIINVDGHKIGIGICY 161


>AE014297-926|AAF54370.1|  283|Drosophila melanogaster CG8132-PA
           protein.
          Length = 283

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
 Frame = +2

Query: 332 NKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIK 511
           N V KI     +    +I   E +N P+       + + E++E+  DG T+  L  LA K
Sbjct: 27  NAVTKIEAAVKEHKPRLITLPECFNAPYG-----TKYFREYSETIPDGYTSQQLSNLARK 81

Query: 512 YAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVG-----DFNESNYYM 676
           + + IV   +  +   +D ++NT  V S TG+++ KHRK H+  +       F ES    
Sbjct: 82  HQVYIVGGTIP-ELGENDAIYNTCTVWSPTGDLVAKHRKMHLFDIDVKGGIRFKESETLS 140

Query: 677 EGNTGHPVFATRYGKIAVNICF 742
            GN    +      KI + IC+
Sbjct: 141 AGN-DFTIINVDGHKIGIGICY 161


>AE014296-1812|AAF50160.2|  343|Drosophila melanogaster CG6559-PA
           protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 413 FAFCTREKQPWCEFAESAEDGPTTTF 490
           F+FCT+EK+P   + E+ + G  +TF
Sbjct: 86  FSFCTQEKKPGKNWVENPKGGGPSTF 111


>AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-PC,
            isoform C protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 778  SEHHPVQDVVPSEADVHRDLAVSGRKYRMAGVTFHVVVG 662
            S   PV   VP+ AD  R+LA +    +MAG  F V VG
Sbjct: 1006 SSSEPVS-AVPTAADKKRELAAARFNNKMAGANFAVGVG 1043


>AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-PA,
            isoform A protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 778  SEHHPVQDVVPSEADVHRDLAVSGRKYRMAGVTFHVVVG 662
            S   PV   VP+ AD  R+LA +    +MAG  F V VG
Sbjct: 1006 SSSEPVS-AVPTAADKKRELAAARFNNKMAGANFAVGVG 1043


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,798,035
Number of Sequences: 53049
Number of extensions: 820315
Number of successful extensions: 2649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2648
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)