Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1828
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   7.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 327 TSTNSTTPLNISWTTSTG 380
           T+T S  PLNI W+T+ G
Sbjct: 53  TATGSP-PLNIDWSTADG 69


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 327 TSTNSTTPLNISWTTSTG 380
           T+T S  PLNI W+T+ G
Sbjct: 53  TATGSP-PLNIDWSTADG 69


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 740 GDLRIFPRRDPSCS 699
           G L IFP  DP CS
Sbjct: 188 GRLNIFPFDDPLCS 201


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 740 GDLRIFPRRDPSCS 699
           G L IFP  DP CS
Sbjct: 188 GRLNIFPFDDPLCS 201


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 740 GDLRIFPRRDPSCS 699
           G L IFP  DP CS
Sbjct: 239 GRLNIFPFDDPLCS 252


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 740 GDLRIFPRRDPSCS 699
           G L IFP  DP CS
Sbjct: 188 GRLNIFPFDDPLCS 201


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 8   LGAGESGKSTIVKQMKIIHESGFTNE 85
           +G    GKSTIVK +  +    F NE
Sbjct: 48  IGHVAHGKSTIVKAISGVQTVRFKNE 73


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 324 ERPKHS*TPESAQSLFIAARSSSLNGS 244
           E  ++S  P+S   L +++R S +NG+
Sbjct: 232 ESHQNSNVPKSVAGLNVSSRRSDMNGT 258


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 604 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 521
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 2   LKQINVIFRHGDRIPDEKNEMYPKDPYL 29


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 604 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 521
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 17  LKQINVIFRHGDRIPDEKNEMYPKDPYL 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,386
Number of Sequences: 438
Number of extensions: 4985
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)