Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1827
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0251 + 26687833-26688120,26689288-26689365,26690499-266905...    29   3.0  
12_02_0388 - 18486957-18487016,18487286-18489418,18489985-184904...    28   9.2  

>05_06_0251 +
           26687833-26688120,26689288-26689365,26690499-26690580,
           26691155-26691195,26691973-26692143,26693586-26693813,
           26694237-26694638
          Length = 429

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 663 IWYNFSYYFTRKRKKETFWLFRNN 734
           IW  F+   T K K+E FW+F+ +
Sbjct: 55  IWPKFAVALTNKEKEEDFWVFKGS 78


>12_02_0388 -
           18486957-18487016,18487286-18489418,18489985-18490484,
           18490728-18490899
          Length = 954

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 727 LNNQKVSFFLFLVK*YEKLYQILVKLKYKLQDVQKIKINVDIKLGSPPPAG 575
           L+ Q  ++F    K    L     +L+ +L DV+   +NV+ KL SP   G
Sbjct: 19  LSKQYAAYFFKARKRVRALEAATERLRERLSDVETRGVNVETKLDSPMRKG 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,368,658
Number of Sequences: 37544
Number of extensions: 275338
Number of successful extensions: 497
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)