Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1719
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.0  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          26   1.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.4  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   5.5  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   5.5  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   5.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 548 FFILFVMSEYLILNVFI 498
           F ILF+   Y++LNVF+
Sbjct: 695 FIILFICGNYILLNVFL 711


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 176 SCGSSRQFAALATKHFSPVHPGA 108
           +CG+  ++ ++++ H  P HPGA
Sbjct: 210 TCGTGWKYRSISSLHAPPSHPGA 232


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = +1

Query: 58   DTKRTVGSLLVITRKPSAPG----WTGLKCF----VASAANCRELPHEPIERLAFC*TLN 213
            +T  T+    + + KP+  G    W G +C+    V S  NCR+LP    E L F  +L 
Sbjct: 1584 ETWATLAVRFLYSLKPNDNGMRFVWRGKECYLPCPVQSVTNCRQLPRRG-EILIFITSLR 1642

Query: 214  V 216
            V
Sbjct: 1643 V 1643


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 194 ARRSIGSCGSSRQFAALATKHFSPVHPGALG 102
           ARR  G       +A +AT  F+P+  G +G
Sbjct: 384 ARRLFGGSEERMDYADVATTVFTPLEYGCVG 414


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 194 ARRSIGSCGSSRQFAALATKHFSPVHPGALG 102
           ARR  G       +A +AT  F+P+  G +G
Sbjct: 360 ARRLFGGSEERMDYADVATTVFTPLEYGCVG 390


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 194 ARRSIGSCGSSRQFAALATKHFSPVHPGALG 102
           ARR  G       +A +AT  F+P+  G +G
Sbjct: 357 ARRLFGGSEERMDYADVATTVFTPLEYGCVG 387


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 155  FAALATKHFSPVHPGALGFLVMTRSDPTVRFVSGRRP 45
            F+ LA   +   H  A  F+ + R D  V+F+  +RP
Sbjct: 1593 FSVLANDSYG-CHDRAHVFIYLIREDQRVKFILRQRP 1628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,175
Number of Sequences: 2352
Number of extensions: 16060
Number of successful extensions: 67
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)