Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1719
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.1  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 204 SAEREALDRFVRQFAAIRGTRNKTL*SCPPRGTRLPCYDKERSH 73
           SA + A+D+F R +    G  N T   C P   +L  +D   SH
Sbjct: 127 SAYKIAIDKFDRLWILDSGIINNTQPMCSP---KLHVFDLNTSH 167


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 204 SAEREALDRFVRQFAAIRGTRNKTL*SCPPR 112
           SA + A+D+F R +    G  N+T+  C P+
Sbjct: 124 SAFKIAIDKFDRLWVLDSGLVNRTVPVCAPK 154


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 557 KFRFFILFVMSEYLILNVFI 498
           K  F I+F+ S +LIL +FI
Sbjct: 2   KENFSIMFIHSIFLILIIFI 21


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 557 KFRFFILFVMSEYLILNVFI 498
           K  F I+F+ S +LIL +FI
Sbjct: 2   KENFSIMFIHSIFLILIIFI 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,714
Number of Sequences: 438
Number of extensions: 3932
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)