Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1712
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    27   0.62 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.83 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    27   0.83 
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   7.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.7  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 541 PSSD*NLPISKWLPTMMWRRD 603
           P+S  NL + +W PT++WR D
Sbjct: 102 PASYGNLNVVRWDPTIVWRPD 122


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -3

Query: 529 SPRLPRVAEGTAFDPPKPDISCLHDGTPLINSRCFFKSLTVAVPLILIPY 380
           SP  P    GT F       SC     P++ S    ++  +AVPL   P+
Sbjct: 76  SPPTPPTRNGTIFRYRSNSASCTGGAAPILESDGASRAAPLAVPLSPPPF 125


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 42  LVAMAENREEILANFQGITAIEDVAE--AIYHLDESNWDLLTA 164
           +V ++EN   +L NF  +T ++ V E   ++  D+SN   L A
Sbjct: 109 IVELSENNNALLQNFMELTELKHVLEKTQVFFSDKSNVQNLEA 151


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 27  FRTQFLVAMAENREEILANFQGITAIED 110
           FR   LVA + N  ++L NF G+    D
Sbjct: 84  FRKFKLVAESVNGRDVLTNFHGMALTTD 111


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 263 YHRYIVVYHFNVVSVILCVRGGGVLILRHHSVYS 162
           YH  + +  +NV+S +   R G  + LR H  +S
Sbjct: 53  YHTDLALPGYNVLSNVDASRRGTAIALRDHLKFS 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,992
Number of Sequences: 2352
Number of extensions: 13232
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)