Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1712
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 30 1.5
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 30 1.5
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 30 1.5
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 30 1.5
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 30 1.5
U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical p... 30 2.0
U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 29 4.7
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 29 4.7
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC024089-4|AAK09073.2| 239|Caenorhabditis elegans Hypothetical ... 28 6.2
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 113 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 165
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 86 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 138
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 272 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 324
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 78 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 130
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 272 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 324
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 113 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 165
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 592 WRRD*RQRTRFTSNTMTGT----TPLSTPGTKSVREVKNDIYSLTDIPARHQS 738
WRR+ + R + +S TM + TP TPG+ + + N I S P R S
Sbjct: 101 WRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNRFPS 153
>U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical
protein F36H5.3a protein.
Length = 728
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 321 INRNSTNGFVELQINWNNKMY 383
I+ +GFVELQ+NW N+++
Sbjct: 601 ISLKCNSGFVELQLNWENELF 621
>U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical
protein F36H5.3b protein.
Length = 843
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 321 INRNSTNGFVELQINWNNKMY 383
I+ +GFVELQ+NW N+++
Sbjct: 601 ISLKCNSGFVELQLNWENELF 621
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 237 MIDDDISVITPKTHPPDREDNNQASTSSI 323
++DDD+ ++T + PP R +++AS + I
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEI 477
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 237 MIDDDISVITPKTHPPDREDNNQASTSSI 323
++DDD+ ++T + PP R +++AS + I
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEI 477
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 237 MIDDDISVITPKTHPPDREDNNQASTSSI 323
++DDD+ ++T + PP R +++AS + I
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEI 477
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 237 MIDDDISVITPKTHPPDREDNNQASTSSI 323
++DDD+ ++T + PP R +++AS + I
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEI 477
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 532 TSPRLPRVAEGTAFDPPKPDISCLHDG 452
T+P++P+ E T FD P ++SC +DG
Sbjct: 13 TTPKVPKKEE-TIFDVPVGNLSCTNDG 38
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 532 TSPRLPRVAEGTAFDPPKPDISCLHDG 452
T+P++P+ E T FD P ++SC +DG
Sbjct: 13 TTPKVPKKEE-TIFDVPVGNLSCTNDG 38
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 532 TSPRLPRVAEGTAFDPPKPDISCLHDG 452
T+P++P+ E T FD P ++SC +DG
Sbjct: 13 TTPKVPKKEE-TIFDVPVGNLSCTNDG 38
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 548 DDGVLHEPETAQGGRGDRLRSPQTRYQLS 462
D+G HE ET+ GR DRL S Q + S
Sbjct: 664 DNGDEHEEETSTVGRHDRLSSRQVSFHKS 692
>AC024089-4|AAK09073.2| 239|Caenorhabditis elegans Hypothetical
protein C36E6.2 protein.
Length = 239
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 57 ENREEILANFQGITAIEDVAE--AIYHLDESNWDLLTAIN 170
++RE ++ F+ I + + + A ++LD +NW+L TAI+
Sbjct: 18 DDRENLIHKFEEIISPQMIPHDLAAFYLDLANWNLSTAIS 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,146,756
Number of Sequences: 27780
Number of extensions: 319795
Number of successful extensions: 1006
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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