Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1700
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.5  
AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.    23   9.9  
AY752901-1|AAV30075.1|   90|Anopheles gambiae peroxidase 7 protein.    23   9.9  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 588 LKLKIRKDNVPPA*DLLNTIVLKPCHEFHP 499
           ++L    +NVP   +L   IV +PC EF P
Sbjct: 659 IQLTSEIENVPQ--NLSKVIVAEPCAEFFP 686


>AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.
          Length = 106

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +1

Query: 37  NNNIDERKAIWSKRHFYILQKSHLKFKIW 123
           N N+   +     RH  I Q  H+ +  W
Sbjct: 33  NRNLSNEEVFQRARHLNIAQYQHIVYNEW 61


>AY752901-1|AAV30075.1|   90|Anopheles gambiae peroxidase 7 protein.
          Length = 90

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 34  VNNNIDERKAIWSKRHFYILQKSHLKFKIW 123
           +N N++  +     RH  I Q  H+ +  W
Sbjct: 7   LNGNLNNEEVFQRARHLNIAQYQHIVYYEW 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,799
Number of Sequences: 2352
Number of extensions: 12137
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)