Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1696
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.36 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.8  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 506 FFQIKSLLQCYLTVLLILQL 447
           FF + ++ QCYLT  L+L L
Sbjct: 172 FFTVFNVAQCYLTTELVLML 191


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = -3

Query: 584 FSRLCTSLYAFVYGWVQNLLEIYQHPFFQIKSLLQCYLTVLLILQLLFAEVHELYLVIF 408
           F +L  +LY   Y + ++    Y     Q+  +  CY   L  +  ++  VHE  ++ F
Sbjct: 115 FGKLLINLYTINYNFKESERNDYVS-LLQLVFVF-CYFIYLFTVYYIYYSVHEASIINF 171


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 401 SAGISPDTTHALLQTAAAESEEQSDN 478
           S  + P+T +A++   A+   E SDN
Sbjct: 451 SPEVFPNTNNAIMTPPASVQTESSDN 476


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 401 SAGISPDTTHALLQTAAAESEEQSDN 478
           S  + P+T +A++   A+   E SDN
Sbjct: 399 SPEVFPNTNNAIMTPPASVQTESSDN 424


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 438 CKQQLQNQKNSQITLQET 491
           C+QQLQ Q+N   +   T
Sbjct: 182 CRQQLQQQQNKSASRTTT 199


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 656 SNYLPSQNPPSLPYP 700
           +NYLP    P LP P
Sbjct: 172 NNYLPLPQVPPLPLP 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,830
Number of Sequences: 336
Number of extensions: 4168
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)