Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1696
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069687-1|AAL39832.1|  214|Drosophila melanogaster LD45836p pro...    97   2e-20
AE014297-194|AAF52060.1|  214|Drosophila melanogaster CG1115-PA ...    97   2e-20
AY070595-1|AAL48066.1|  200|Drosophila melanogaster RE69619p pro...    37   0.025
AL031581-1|CAA20890.1|  200|Drosophila melanogaster EG:115C2.5 p...    37   0.025
AJ271295-1|CAB76375.1|  200|Drosophila melanogaster mod(r) prote...    37   0.025
AE014298-66|AAN09016.1|  200|Drosophila melanogaster CG17828-PC,...    37   0.025
AE014298-65|AAF45525.1|  200|Drosophila melanogaster CG17828-PA,...    37   0.025
BT023840-1|AAZ86761.1| 1078|Drosophila melanogaster LD10265p pro...    35   0.100
BT001668-1|AAN71423.1|  962|Drosophila melanogaster RE49559p pro...    35   0.100
AF222864-1|AAF34689.1| 1078|Drosophila melanogaster Dspt5 protein.     35   0.100
AE013599-2886|AAS64808.1|  962|Drosophila melanogaster CG7626-PB...    35   0.100
AE013599-2885|AAF57561.1| 1078|Drosophila melanogaster CG7626-PA...    35   0.100
AF492764-1|AAM11673.1|  417|Drosophila melanogaster gag protein ...    31   1.6  
AE014297-3977|AAN14081.2|  325|Drosophila melanogaster CG31081-P...    31   1.6  
AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB...    29   5.0  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    29   8.7  
AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p pro...    29   8.7  
AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p pro...    29   8.7  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    29   8.7  
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ...    29   8.7  

>AY069687-1|AAL39832.1|  214|Drosophila melanogaster LD45836p
           protein.
          Length = 214

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS G+  +T  ALLQTAA+ESEEQ++ + + F    +GV+ FL+ F PIR+ MH+R+ KA
Sbjct: 98  KSGGVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRRTMHLRRLKA 157

Query: 578 EKMSELLRNSNQNAYGNGATKPY--LPYSNYLPSQNPPSLPYPV-GPLNMPMP 727
           EKM EL+R   Q    N +   Y  +P S + P+    S PYP+ GPL MPMP
Sbjct: 158 EKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASG-GSAPYPIMGPL-MPMP 208


>AE014297-194|AAF52060.1|  214|Drosophila melanogaster CG1115-PA
           protein.
          Length = 214

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS G+  +T  ALLQTAA+ESEEQ++ + + F    +GV+ FL+ F PIR+ MH+R+ KA
Sbjct: 98  KSGGVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRRTMHLRRLKA 157

Query: 578 EKMSELLRNSNQNAYGNGATKPY--LPYSNYLPSQNPPSLPYPV-GPLNMPMP 727
           EKM EL+R   Q    N +   Y  +P S + P+    S PYP+ GPL MPMP
Sbjct: 158 EKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASG-GSAPYPIMGPL-MPMP 208


>AY070595-1|AAL48066.1|  200|Drosophila melanogaster RE69619p
           protein.
          Length = 200

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS   +P     LLQ AA+ ++   D     FL+GK  V  FL  ++  +K    RK K 
Sbjct: 126 KSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKE 185

Query: 578 EKMSELL 598
           E++   L
Sbjct: 186 ERLGTQL 192


>AL031581-1|CAA20890.1|  200|Drosophila melanogaster EG:115C2.5
           protein.
          Length = 200

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS   +P     LLQ AA+ ++   D     FL+GK  V  FL  ++  +K    RK K 
Sbjct: 126 KSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKE 185

Query: 578 EKMSELL 598
           E++   L
Sbjct: 186 ERLGTQL 192


>AJ271295-1|CAB76375.1|  200|Drosophila melanogaster mod(r) protein
           protein.
          Length = 200

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS   +P     LLQ AA+ ++   D     FL+GK  V  FL  ++  +K    RK K 
Sbjct: 126 KSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKE 185

Query: 578 EKMSELL 598
           E++   L
Sbjct: 186 ERLGTQL 192


>AE014298-66|AAN09016.1|  200|Drosophila melanogaster CG17828-PC,
           isoform C protein.
          Length = 200

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS   +P     LLQ AA+ ++   D     FL+GK  V  FL  ++  +K    RK K 
Sbjct: 126 KSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKE 185

Query: 578 EKMSELL 598
           E++   L
Sbjct: 186 ERLGTQL 192


>AE014298-65|AAF45525.1|  200|Drosophila melanogaster CG17828-PA,
           isoform A protein.
          Length = 200

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +2

Query: 398 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 577
           KS   +P     LLQ AA+ ++   D     FL+GK  V  FL  ++  +K    RK K 
Sbjct: 126 KSDEYAPQHIRELLQIAASNADGDCDRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKE 185

Query: 578 EKMSELL 598
           E++   L
Sbjct: 186 ERLGTQL 192


>BT023840-1|AAZ86761.1| 1078|Drosophila melanogaster LD10265p
           protein.
          Length = 1078

 Score = 35.1 bits (77), Expect = 0.100
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 653 YSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           YS + PS +P   PYPVG +N P P  Y
Sbjct: 916 YSPFNPSPSPAPSPYPVGYMNTPSPSTY 943


>BT001668-1|AAN71423.1|  962|Drosophila melanogaster RE49559p
           protein.
          Length = 962

 Score = 35.1 bits (77), Expect = 0.100
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 653 YSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           YS + PS +P   PYPVG +N P P  Y
Sbjct: 800 YSPFNPSPSPAPSPYPVGYMNTPSPSTY 827


>AF222864-1|AAF34689.1| 1078|Drosophila melanogaster Dspt5 protein.
          Length = 1078

 Score = 35.1 bits (77), Expect = 0.100
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 653 YSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           YS + PS +P   PYPVG +N P P  Y
Sbjct: 916 YSPFNPSPSPAPSPYPVGYMNTPSPSTY 943


>AE013599-2886|AAS64808.1|  962|Drosophila melanogaster CG7626-PB,
           isoform B protein.
          Length = 962

 Score = 35.1 bits (77), Expect = 0.100
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 653 YSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           YS + PS +P   PYPVG +N P P  Y
Sbjct: 800 YSPFNPSPSPAPSPYPVGYMNTPSPSTY 827


>AE013599-2885|AAF57561.1| 1078|Drosophila melanogaster CG7626-PA,
           isoform A protein.
          Length = 1078

 Score = 35.1 bits (77), Expect = 0.100
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 653 YSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           YS + PS +P   PYPVG +N P P  Y
Sbjct: 916 YSPFNPSPSPAPSPYPVGYMNTPSPSTY 943


>AF492764-1|AAM11673.1|  417|Drosophila melanogaster gag protein
           protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 569 YKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP-YPVGPLNMPMP 727
           +K    S    N+  N   NG  KP  P+  Y  +   P  P YP  P++ P P
Sbjct: 200 FKPAPNSNRTPNNLPNRQVNGQNKPITPFQPYHNNVFQPYYPPYPYAPIHTPRP 253


>AE014297-3977|AAN14081.2|  325|Drosophila melanogaster CG31081-PA
           protein.
          Length = 325

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
 Frame = +2

Query: 545 RKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSN---YLPSQNP------PSLPY 697
           + Q+H  KYK E+ +   +   Q  YG G++ P    ++   Y P Q P      PS  Y
Sbjct: 157 KPQVHFVKYKTEEEAAQAQQYIQAQYGGGSSIPQPGKASSLGYYPEQQPQYEQDAPSEEY 216

Query: 698 PVGPLN-MPMP 727
           P G +  +P P
Sbjct: 217 PAGQVGYLPSP 227


>AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB,
           isoform B protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = +2

Query: 587 SELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           S  +       Y  GA  PY P S   PS  P   PYP    + P P  Y
Sbjct: 53  SSQMHPQQHQQYPGGAPAPYPPMSAPYPSAAPSYPPYPT---SNPYPAQY 99


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +2

Query: 629 GATKPYLPYSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           G T P  P     P   PPS PYP  P   P PG Y
Sbjct: 231 GTTYPQPPPPPPPPPPPPPSYPYP--PYPYPPPGPY 264


>AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p
           protein.
          Length = 741

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2

Query: 608 NQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGP 709
           N N Y  G  + Y PY  Y P Q PP  P P  P
Sbjct: 290 NMN-YNYGYHQAYSPYGMY-PQQTPPPTPPPPSP 321


>AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2

Query: 608 NQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGP 709
           N N Y  G  + Y PY  Y P Q PP  P P  P
Sbjct: 64  NMN-YNYGYHQAYSPYGMY-PQQTPPPTPPPPSP 95


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +2

Query: 629 GATKPYLPYSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
           G T P  P     P   PPS PYP  P   P PG Y
Sbjct: 233 GTTYPQPPPPPPPPPPPPPSYPYP--PYPYPPPGPY 266


>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
            protein.
          Length = 2252

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2

Query: 608  NQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGP 709
            N N Y  G  + Y PY  Y P Q PP  P P  P
Sbjct: 1798 NMN-YNYGYHQAYSPYGMY-PQQTPPPTPPPPSP 1829


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,083,140
Number of Sequences: 53049
Number of extensions: 728533
Number of successful extensions: 2711
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2701
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)