Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1696
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 30 1.5
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 2.6
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 29 2.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 4.5
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 29 4.5
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 29 4.5
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 29 4.5
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 29 4.5
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 4.5
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 6.0
U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine rec... 28 6.0
U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical pr... 28 7.9
U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein. 28 7.9
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 28 7.9
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 28 7.9
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/89 (29%), Positives = 55/89 (61%)
Frame = +2
Query: 392 ETKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKY 571
++ S+ S DTT +L+Q AA E+++ ++ + F +G++ V+ FL+ F+ + H+RK
Sbjct: 107 DSVSSSKSLDTTSSLMQVAAQEADDDAEALFTQFENGEISVEIFLKQFKDKKTIAHLRKI 166
Query: 572 KAEKMSELLRNSNQNAYGNGATKPYLPYS 658
K+++++ LLR ++Y P +P++
Sbjct: 167 KSDRLAALLREQTYSSYAQPTVPPPMPHA 195
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 602 NSNQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
N N N NG P PY PP PYP G P PG +
Sbjct: 274 NGNGNNGNNGNGHPQYPYPVPPHGYYPPGYPYPPG-YPYPPPGAF 317
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 623 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 507
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 623 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 507
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 632 ATKPYLPYSNYLPSQNPPSLPYPVGPLNMPMPGMY 736
A P+ PY+NY PP YP ++ P +Y
Sbjct: 592 AYPPFYPYTNYPNIWQPPYQNYPYNQVDYQQPWLY 626
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 473 DNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAY 622
D + + + + ++ + + + +Q I KY+ +K E LRNS + AY
Sbjct: 289 DRVEKKYNNSVADMNSLPDKSQQLNEQYEIAKYRVDKHYEELRNSIEEAY 338
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 596 LRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMP-MPG 730
+R Q G Y P+ P + +PYP P MP PG
Sbjct: 165 MRQQQQQPNGQAPPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPG 210
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 617 AYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMP 721
++ +G P P+ Y +Q PP+ P+P G + P
Sbjct: 449 SWNHGVHPPAWPHDVYHLTQYPPTYPHPPGTVGYP 483
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 617 AYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMP 721
++ +G P P+ Y +Q PP+ P+P G + P
Sbjct: 491 SWNHGVHPPAWPHDVYHLTQYPPTYPHPPGTVGYP 525
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 515 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
+++L+ ++ I+++ K + EK RN+ YG G K S P + P +
Sbjct: 9 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 66
Query: 695 YPVGPLNMP 721
+PVG L +P
Sbjct: 67 FPVG-LELP 74
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 515 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
+++L+ ++ I+++ K + EK RN+ YG G K S P + P +
Sbjct: 93 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 150
Query: 695 YPVGPLNMP 721
+PVG L +P
Sbjct: 151 FPVG-LELP 158
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 515 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
+++L+ ++ I+++ K + EK RN+ YG G K S P + P +
Sbjct: 97 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 154
Query: 695 YPVGPLNMP 721
+PVG L +P
Sbjct: 155 FPVG-LELP 162
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 515 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
+++L+ ++ I+++ K + EK RN+ YG G K S P + P +
Sbjct: 93 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 150
Query: 695 YPVGPLNMP 721
+PVG L +P
Sbjct: 151 FPVG-LELP 158
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 617 AYGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMP 721
++ +G P P+ Y +Q PP+ P+P G + P
Sbjct: 491 SWNHGVHPPAWPHDVYHLTQYPPTYPHPPGTVGYP 525
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 518 KFLEDFEPIRKQMHIRKYKAE-KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
K E+ KQ+ K + E ++ E L N + +++G +P P L +N P
Sbjct: 314 KMEEELRKKEKQLEEEKQQMEQRLKEQLSNWH-SSFGPNQPRPPAPLPTDLQLENLGYPP 372
Query: 695 YPVGPLNMPMP 727
P PL P P
Sbjct: 373 SPPAPLAQPTP 383
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 518 KFLEDFEPIRKQMHIRKYKAE-KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPPSLP 694
K E+ KQ+ K + E ++ E L N + +++G +P P L +N P
Sbjct: 314 KMEEELRKKEKQLEEEKQQMEQRLKEQLSNWH-SSFGPNQPRPPAPLPTDLQLENLGYPP 372
Query: 695 YPVGPLNMPMP 727
P PL P P
Sbjct: 373 SPPAPLAQPTP 383
>U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 8 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 542 WVQNLLEIYQHPFFQIKSLLQCYLTVL-LILQLLFAEVHELYL 417
WVQ+ HPFF + S++ L +L + + LF V +L L
Sbjct: 49 WVQHKKSYGYHPFFMVYSMVGLILVLLDIFITRLFVYVPQLCL 91
>U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical
protein F59A3.7 protein.
Length = 260
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +3
Query: 222 GGVAVLTILRP*NSYLKVGVGIYVVDVWDEWMNTRLAVSSSTIYA*KKSFITLLPFQKQN 401
G +AV TI+ N+ K+ VG+ D W+ + S I F +
Sbjct: 83 GVLAVYTIISLLNTIFKMSVGLSDGDWWERCFVGSVETFHSIITILHSIFQFFISIILIR 142
Query: 402 LLEYHQIQLMHFCKQQLQNQK 464
+ ++ I L H C +LQ K
Sbjct: 143 MSFWYVIVLTHICHFELQKSK 163
>U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 560 IRKYKAEKMSELLRNSNQNA----YGNGATKPYLPYSNYLPSQNPPSLPYPVGPLNMP 721
I+ K ++ E RN +NA YG G K S P + P + +PVG L +P
Sbjct: 102 IQSMKQKEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIKFPVG-LELP 158
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 488 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 598
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 238 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 273
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 488 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 598
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 235 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,936,554
Number of Sequences: 27780
Number of extensions: 367639
Number of successful extensions: 1225
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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