Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1695
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   1.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.2  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 498 PRMCKMVTKNQISDRTHLVLVIVKLEYTTQQPYCYKACG 382
           P  C + +K  I       LVI    +T ++PY  KACG
Sbjct: 175 PHKCTVCSKTFIQSGQ---LVIHMRTHTGEKPYVCKACG 210


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 530 AKRVTNLSCALNFHLFLKTAP 592
           AK+   L   + FHL++ TAP
Sbjct: 351 AKKGFKLKQGIQFHLYINTAP 371


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 209 HSPSPSAHCPLHFSLGVNSSPA 144
           +SPSP+   P H     ++SPA
Sbjct: 60  NSPSPTGSSPQHSGSSASTSPA 81


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 542 LLAWHYWGHDTFQLRLE 492
           +L W  W +D +QL LE
Sbjct: 146 VLKWASWTYDGYQLELE 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,096
Number of Sequences: 438
Number of extensions: 4793
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)