Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1683
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    25   1.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   10.0 
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    22   10.0 

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 93  PPHRRAGPRDRARTERVHGGRG 158
           PP R+ G     RT R+ GG+G
Sbjct: 230 PPGRKVGLIAARRTGRIRGGKG 251


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 121  IEREQNVYTGDAEERQEFINLEEEEAADFDRYGG 222
            +++E +    D EE +E    E+EE  D D  GG
Sbjct: 957  VKKEVDAAEDDEEEEEE----EQEEEEDEDEEGG 986


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 328 ADFFRCPGAALSLNPALHITNKTKKKTSV 242
           +++FRC GA     PA H ++     T++
Sbjct: 108 SNYFRCAGAGTLHLPASHQSDANMLPTNI 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,213
Number of Sequences: 2352
Number of extensions: 8709
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)