Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1682
(397 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 170 7e-43
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 170 7e-43
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 170 7e-43
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 170 7e-43
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 42 4e-04
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 42 4e-04
AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p pro... 37 0.011
AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA ... 37 0.011
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro... 29 2.2
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA... 29 2.2
BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p pro... 29 3.0
BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p pro... 29 3.0
AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-P... 29 3.0
AE014298-2466|AAF48655.2| 190|Drosophila melanogaster CG18358-P... 28 5.2
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 27 9.0
AY075456-1|AAL68269.1| 190|Drosophila melanogaster RE13557p pro... 27 9.0
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 27 9.0
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 27 9.0
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 27 9.0
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 27 9.0
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 27 9.0
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 170 bits (413), Expect = 7e-43
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = +3
Query: 99 KSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 278
K+ YF+K+++L E+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTMMRKAI+ HL
Sbjct: 10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHL 69
Query: 279 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 392
+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV
Sbjct: 70 ENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKV 107
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 170 bits (413), Expect = 7e-43
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = +3
Query: 99 KSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 278
K+ YF+K+++L E+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTMMRKAI+ HL
Sbjct: 10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHL 69
Query: 279 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 392
+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV
Sbjct: 70 ENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKV 107
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 170 bits (413), Expect = 7e-43
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = +3
Query: 99 KSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 278
K+ YF+K+++L E+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTMMRKAI+ HL
Sbjct: 10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHL 69
Query: 279 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 392
+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV
Sbjct: 70 ENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKV 107
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 170 bits (413), Expect = 7e-43
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = +3
Query: 99 KSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 278
K+ YF+K+++L E+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTMMRKAI+ HL
Sbjct: 10 KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHL 69
Query: 279 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 392
+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV
Sbjct: 70 ENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKV 107
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 LGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKL 305
+G+YP F+ N+ + ++ +R L+ +S + GKN +M+ + + P L KL
Sbjct: 34 VGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKL 93
Query: 306 LPHIKGNVGFVFTRGDLVEV 365
+ G VG +FT EV
Sbjct: 94 SKRLTGQVGLLFTDKSKEEV 113
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 LGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKL 305
+G+YP F+ N+ + ++ +R L+ +S + GKN +M+ + + P L KL
Sbjct: 34 VGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKL 93
Query: 306 LPHIKGNVGFVFTRGDLVEV 365
+ G VG +FT EV
Sbjct: 94 SKRLTGQVGLLFTDKSKEEV 113
>AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p
protein.
Length = 271
Score = 36.7 bits (81), Expect = 0.011
Identities = 30/91 (32%), Positives = 45/91 (49%)
Frame = +1
Query: 115 LRSSNSWASTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQP 294
L SN ++ + S P A + CS S S P S +W C+KPS T +P
Sbjct: 60 LELSNEGSAFKKESCPPPAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKP 115
Query: 295 SRNCCHTSRATLALCSPAETSLRSATNCWRT 387
+R CC + +A L CSP +T ++C++T
Sbjct: 116 TR-CCASPKAPLVPCSPMDT---PKSSCFKT 142
>AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA
protein.
Length = 271
Score = 36.7 bits (81), Expect = 0.011
Identities = 30/91 (32%), Positives = 45/91 (49%)
Frame = +1
Query: 115 LRSSNSWASTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQP 294
L SN ++ + S P A + CS S S P S +W C+KPS T +P
Sbjct: 60 LELSNEGSAFKKESCPPPAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKP 115
Query: 295 SRNCCHTSRATLALCSPAETSLRSATNCWRT 387
+R CC + +A L CSP +T ++C++T
Sbjct: 116 TR-CCASPKAPLVPCSPMDT---PKSSCFKT 142
>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 221 QYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLCVHPRRPR*GP 367
Q + + H AQ+HQ P Q +P++ + Q + + RPR P
Sbjct: 230 QQNVYQQYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQERPRYEP 278
>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 221 QYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLCVHPRRPR*GP 367
Q + + H AQ+HQ P Q +P++ + Q + + RPR P
Sbjct: 230 QQNVYQQYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQERPRYEP 278
>BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p
protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 211 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATN 375
+ +P + S T+ A WTT QP++N T+ T SL++ N
Sbjct: 321 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKN 375
>BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p
protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 211 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATN 375
+ +P + S T+ A WTT QP++N T+ T SL++ N
Sbjct: 321 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKN 375
>AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-PA
protein.
Length = 584
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 211 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATN 375
+ +P + S T+ A WTT QP++N T+ T SL++ N
Sbjct: 292 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKN 346
>AE014298-2466|AAF48655.2| 190|Drosophila melanogaster CG18358-PA
protein.
Length = 190
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +1
Query: 115 LRSSNSWASTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQP 294
LR + SW ST S + ARN ++ SR PV SW T CA+P+ + QP
Sbjct: 123 LRRTRSWPSTP--SGIGSASSARN--AKHPSR---PVPLSWRITNRCARPAPIKESGTQP 175
Query: 295 SRNCCH 312
H
Sbjct: 176 FHIAIH 181
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 1561 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 1603
>AY075456-1|AAL68269.1| 190|Drosophila melanogaster RE13557p
protein.
Length = 190
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 115 LRSSNSWASTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQP 294
LR + SW ST S + ARN + SR PV SW T CA+P+ + QP
Sbjct: 123 LRRTRSWPSTP--SGIGSASSARN--AEHPSR---PVPLSWRITNRCARPAPIKESGTQP 175
Query: 295 SRNCCH 312
H
Sbjct: 176 FHIAIH 181
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 478 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 520
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 383 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 425
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 478 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 520
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 478 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 520
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRTKFQ 396
A P+ T+ PS + +S +C+ A R AT CW TK Q
Sbjct: 478 ANPASTSSAAAAPSTSSSSSSSGD-NICANAR---RRATECWATKLQ 520
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,616,327
Number of Sequences: 53049
Number of extensions: 451474
Number of successful extensions: 1927
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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