Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1682
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 144 3e-35
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical pr... 28 2.8
U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium transp... 28 2.8
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 27 6.4
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 27 6.4
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 26 8.5
U28943-10|AAA68362.1| 329|Caenorhabditis elegans Dehydrogenases... 26 8.5
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 26 8.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 144 bits (348), Expect = 3e-35
Identities = 65/105 (61%), Positives = 83/105 (79%)
Frame = +3
Query: 75 VGRTRLLGKSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMM 254
V R K+NYF K+++L EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+
Sbjct: 2 VREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMI 61
Query: 255 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 389
RKA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+
Sbjct: 62 RKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENR 106
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = +1
Query: 220 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLALCSPAETSLRSATNCWRT 387
P C+ + C T ++P+ C H + T CSP + C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162
>Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical
protein C44H9.2 protein.
Length = 755
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 397 LGTLFSNSLSRTSTRSPRVNTK 332
LGT+FS SLS T TR + TK
Sbjct: 278 LGTVFSYSLSETQTRLLEIGTK 299
>U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium
transporter homolog protein4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 175 TLSAPTMKHFGYSPKSWMIL 116
TL P + H+G+ PK WM L
Sbjct: 132 TLVYPILTHWGWHPKGWMAL 151
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 94 LGSLTTSLRSSNSWASTQNVSSWVPITWARNRCSRS 201
+G++TT+LR S +ST S W+ + + C+ S
Sbjct: 243 IGTITTALRKKASSSSTHQRSHWLEYSLDGHDCALS 278
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 186 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLL 308
+M RI RGS + G+N ++ ++ H NP ++KLL
Sbjct: 240 EMDLQRIMERGS-LKHRGQNQKFKQMLEKHASRNPEVKKLL 279
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 94 LGSLTTSLRSSNSWASTQNVSSWVPITWARNRCSRS 201
+G++TT+LR S +ST S W+ + + C+ S
Sbjct: 243 IGTITTALRKKASSSSTHQRSHWLEYSLDGHDCALS 278
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 26.2 bits (55), Expect = 8.5
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 GGQGYLGSLTTS-LRSSNSWASTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*C 255
G Q +G + S L N + S+ + A +R S S S+ + + Q
Sbjct: 121 GRQTGMGPRSMSKLADPNESRMVREFSNLSQSSVASSRASASASKPRPQFTAPDPRRQSL 180
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLALCSPAETS 357
A P K + TT S+ R +LA PAE +
Sbjct: 181 APPKKASTTTAPVSKPSLSKPRQSLAPSKPAEVT 214
>U28943-10|AAA68362.1| 329|Caenorhabditis elegans Dehydrogenases,
short chain protein7 protein.
Length = 329
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 78 GRTRLLGKSNYFVKIIQLLGEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 257
GRTR Y ++ I+ + K F+V G +SL G+ +V++ +N
Sbjct: 6 GRTRKFYSRTYALETIKGVNLAGKTFVVTGTTSGIGIETARSLSLNGAHVVMLNRNLEES 65
Query: 258 KAIK 269
+ +K
Sbjct: 66 EKLK 69
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 233 HGKKHNDAQSHQRPPGQQSSPRETVAT 313
HG HND +PP S+P + +T
Sbjct: 40 HGGHHNDDDCTTKPPKSTSTPSTSTST 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,352,399
Number of Sequences: 27780
Number of extensions: 218966
Number of successful extensions: 743
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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