Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1674
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    25   2.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.7  

>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 119 LLQSFINAARYLEHNHIVLRYFVIKYTI 36
           +L SF++A+R+   +HI +  F I  T+
Sbjct: 142 VLDSFLSASRWTAGDHITVADFAIAVTV 169


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 452 AIVIVCFVWIVAFQLYAAHFN 514
           A++++C V+ +AF L++ H N
Sbjct: 774 ALILLCVVFGIAFVLFSRHKN 794


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 178  RPLPNPCPKCF*RSNMECCFQHHNPLKEPHGLDRCRNNIL 297
            RP  + CP C  +       + H  +K P   DR  N+I+
Sbjct: 919  RPQSHECPVCGQKFTRRDNMKAHCKVKHPELRDRFYNHIV 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,446
Number of Sequences: 2352
Number of extensions: 14075
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)