Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1673
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.94 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   0.94 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   6.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 278 KIEDTNPLVFIVHTSANKPHIKAAVKKLYDINVAKVNT 165
           K ++   +V I   SA KP  K    K+Y +   K  T
Sbjct: 189 KQDNFRAIVSIFPDSARKPFFKLLTSKIYKVLEEKYKT 226


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 42  NFYS*KIWNSLYDANFVGNVQCVIIS 119
           +FY      S Y  NF G++Q +IIS
Sbjct: 111 HFYYPVATMSFYVLNFFGSIQFIIIS 136


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 331 WMPTTSLNSLSRLKQQ*RRLKIPTPWSLL 245
           WMP+T  N L  L      +KI    S+L
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISML 881


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 331 WMPTTSLNSLSRLKQQ*RRLKIPTPWSLL 245
           WMP+T  N L  L      +KI    S+L
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISML 881


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 225 LVCTCVDNKDQGVGIFNLLHCCFRREREFNDVVGI 329
           +VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 289 IVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 214 LIWGLFALVWTIKTKGLVSSIFFIAASDVR 303
           L+W     +  +    +V  +FF   SDVR
Sbjct: 256 LLWITVTFILLVGDSYIVMYVFFFHLSDVR 285



 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 92 NKIGII*TVPYFL 54
          +KIGI+ TV YF+
Sbjct: 35 SKIGIVQTVAYFV 47


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 225 LVCTCVDNKDQGVGIFNLLHCCFRREREFNDVVGI 329
           +VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 289 IVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 160 MRVLTLATFIS*SFLTAALIWGLFALVWTIKTKG 261
           +R + L +     + T + +W    L+W I T G
Sbjct: 658 VRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLG 691


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 279  LHCCFRREREFNDVVGIH 332
            LHC + +   FN   G+H
Sbjct: 1295 LHCLWGKYEVFNCAPGLH 1312


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 214 LIWGLFALVWTIKT 255
           L WGLF ++ T+ T
Sbjct: 2   LTWGLFCVLVTLAT 15


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 269 DTNPLVFIVHTSANKPHIKAAVKK 198
           D  P +    TS  +PH+   VKK
Sbjct: 152 DAPPPITSFETSGLRPHLLENVKK 175


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 331 WMPTTSLNSLSRLKQQ*RRLKI 266
           WMP+T  N L  L      +KI
Sbjct: 620 WMPSTMANILDLLMDYEHTVKI 641


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 92  WQRPMRHNL 118
           WQ  +RHNL
Sbjct: 127 WQNSIRHNL 135


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 93   GNVQCVIISSESYVRFLFTIRP 158
            GN + V++  +     +FT+RP
Sbjct: 942  GNTERVLVPGDQTEAGVFTLRP 963


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,081
Number of Sequences: 336
Number of extensions: 1437
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)