Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1673
         (357 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   3.4  
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    22   6.0  
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    22   6.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   7.9  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    22   7.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   7.9  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 203 KKLYDINVAKVNTLIRPDG 147
           K+LYD  ++  N LIRP G
Sbjct: 25  KRLYDDLLSNYNRLIRPVG 43


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 350 LPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLV 252
           LP   R +AY       TS  A KK+ DT  LV
Sbjct: 105 LPVGKRANAYYKCLVESTSGDAFKKVFDTVELV 137


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 350 LPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLV 252
           LP   R +AY       TS  A KK+ DT  LV
Sbjct: 105 LPVGKRANAYYKCLVESTSGDAFKKVFDTVELV 137


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 203 KKLYDINVAKVNTLIRP 153
           K+LYD  ++  N LIRP
Sbjct: 31  KRLYDDLLSNYNRLIRP 47


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 203 KKLYDINVAKVNTLIRP 153
           K+LYD  ++  N LIRP
Sbjct: 37  KRLYDDLLSNYNRLIRP 53


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 224 PHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 123
           PH+KA ++K   I  A    +    G K +  RL
Sbjct: 760 PHVKAVIQKATQIVQAVTQLMPNHRGPKTSRCRL 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,379
Number of Sequences: 2352
Number of extensions: 5713
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)