Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1673
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 164 3e-41
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 163 4e-41
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 163 4e-41
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 163 4e-41
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 48 5e-06
BT022668-1|AAY55084.1| 515|Drosophila melanogaster IP12246p pro... 29 2.3
AE014296-3029|AAF49255.3| 473|Drosophila melanogaster CG18234-P... 29 2.3
EF078695-1|ABK63801.1| 786|Drosophila melanogaster Yurt delta p... 28 3.0
BT015265-1|AAT94494.1| 972|Drosophila melanogaster LD33734p pro... 28 3.0
AY061133-1|AAL28681.1| 729|Drosophila melanogaster LD11531p pro... 28 3.0
AE014297-1692|AAF54951.1| 972|Drosophila melanogaster CG9764-PA... 28 3.0
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 27 7.0
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 27 7.0
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 27 7.0
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 27 7.0
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 27 7.0
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 27 7.0
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 27 7.0
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 164 bits (398), Expect = 3e-41
Identities = 76/94 (80%), Positives = 85/94 (90%)
Frame = -2
Query: 356 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDINVA 177
KS+P RNRMDAYNIIK+PLT+EAAMKKIED N LVF+ H ANK H++AAV+KLYDI VA
Sbjct: 184 KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVA 243
Query: 176 KVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 75
KVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 244 KVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 163 bits (397), Expect = 4e-41
Identities = 76/94 (80%), Positives = 85/94 (90%)
Frame = -2
Query: 356 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDINVA 177
KS+P RNRMDAYNIIK+PLT+EAAMKKIED N LVF+ H ANK H++AAV+KLYDI VA
Sbjct: 176 KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVA 235
Query: 176 KVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 75
KVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 236 KVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 163 bits (397), Expect = 4e-41
Identities = 76/94 (80%), Positives = 85/94 (90%)
Frame = -2
Query: 356 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDINVA 177
KS+P RNRMDAYNIIK+PLT+EAAMKKIED N LVF+ H ANK H++AAV+KLYDI VA
Sbjct: 176 KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVA 235
Query: 176 KVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 75
KVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 236 KVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 163 bits (397), Expect = 4e-41
Identities = 76/94 (80%), Positives = 85/94 (90%)
Frame = -2
Query: 356 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDINVA 177
KS+P RNRMDAYNIIK+PLT+EAAMKKIED N LVF+ H ANK H++AAV+KLYDI VA
Sbjct: 184 KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVA 243
Query: 176 KVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 75
KVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 244 KVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = -1
Query: 357 KVSA*EKSHGCLQHH*IPSHV*SSNEED*RYQPLGLYCPHK-CKQAPYQGC-SQETL*YK 184
++ A ++ HG +QHH +P+ +EED Q GL PH +Q + C S + L ++
Sbjct: 166 EIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGL--PHTPARQQEPRACRSAQALRHQ 223
Query: 183 CC*SQHSHQA*W*KESVXXXXXXXXRIGRCQQNWHHINCSI 61
+ +H A W +E + R G CQQ+ HHI+ +I
Sbjct: 224 GGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264
>BT022668-1|AAY55084.1| 515|Drosophila melanogaster IP12246p
protein.
Length = 515
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 245 VHTSANKPHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 108
V T + KPHI +YD ++KV + P K + A DY+
Sbjct: 309 VETLSLKPHIVLYHDVIYDSEISKVKNISLPSLKSPLRILYAIDYN 354
>AE014296-3029|AAF49255.3| 473|Drosophila melanogaster CG18234-PB
protein.
Length = 473
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 245 VHTSANKPHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 108
V T + KPHI +YD ++KV + P K + A DY+
Sbjct: 309 VETLSLKPHIVLYHDVIYDSEISKVKNISLPSLKSPLRILYAIDYN 354
>EF078695-1|ABK63801.1| 786|Drosophila melanogaster Yurt delta
protein.
Length = 786
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Frame = -2
Query: 320 NIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDIN--------VAKVNT 165
+I+K P S A + I D N + ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 164 LIRPDGKKKAYVRLAR 117
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
>BT015265-1|AAT94494.1| 972|Drosophila melanogaster LD33734p
protein.
Length = 972
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Frame = -2
Query: 320 NIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDIN--------VAKVNT 165
+I+K P S A + I D N + ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 164 LIRPDGKKKAYVRLAR 117
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
>AY061133-1|AAL28681.1| 729|Drosophila melanogaster LD11531p
protein.
Length = 729
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Frame = -2
Query: 320 NIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDIN--------VAKVNT 165
+I+K P S A + I D N + ++ + + H +K+L + N +A VNT
Sbjct: 360 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 419
Query: 164 LIRPDGKKKAYVRLAR 117
P G K + AR
Sbjct: 420 TALPPGNIKCNILKAR 435
>AE014297-1692|AAF54951.1| 972|Drosophila melanogaster CG9764-PA
protein.
Length = 972
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Frame = -2
Query: 320 NIIKFPLTSEAAMKKIEDTNPLVFIVHTSANKPHIKAAVKKLYDIN--------VAKVNT 165
+I+K P S A + I D N + ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 164 LIRPDGKKKAYVRLAR 117
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1454 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1454 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1454 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1454 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 350 LPKRNRM-DAYNIIKFPLTSEAAMKKIED 267
LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 LPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,005,411
Number of Sequences: 53049
Number of extensions: 256670
Number of successful extensions: 689
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -