Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1664
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 234 5e-62
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 98 4e-21
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 92 4e-19
AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical ... 68 5e-12
Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical pr... 35 0.046
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.061
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.57
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.57
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 31 0.57
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.7
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 30 1.7
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 30 1.7
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.0
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.0
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.0
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 29 3.0
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 29 3.0
Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical pr... 28 5.3
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 5.3
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 5.3
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 5.3
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 5.3
U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 28 7.0
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 7.0
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 9.2
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 234 bits (572), Expect = 5e-62
Identities = 110/145 (75%), Positives = 132/145 (91%)
Frame = +2
Query: 239 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVK 418
M++LFG + TP E+LR+NQRALNKA+R+LDRER +ME QEKKVIADIK +AK+ QMD+VK
Sbjct: 1 MDFLFGRRKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVK 60
Query: 419 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMP 598
+MAKDLVRTRRY++KF++MKANIQAVSLK+QTLKSQ MA AMKGVT+AM +MNRQLN+P
Sbjct: 61 VMAKDLVRTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLP 120
Query: 599 QIQKILQEFEKQSEIMDMKEEMMND 673
QIQKI+ EFEKQSEIMDMKEE+M D
Sbjct: 121 QIQKIMMEFEKQSEIMDMKEEVMGD 145
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 98.3 bits (234), Expect = 4e-21
Identities = 51/138 (36%), Positives = 80/138 (57%)
Frame = +2
Query: 260 KMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLV 439
K P E+ R N+R L K RDL+ +R +M+++EK++ +IKKLA +G DA + +AK LV
Sbjct: 6 KPDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARHLAKQLV 65
Query: 440 RTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQ 619
+ R K + M A I V + ++S + M AM + M MN Q+ + ++ ++
Sbjct: 66 QLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEKVAANMR 125
Query: 620 EFEKQSEIMDMKEEMMND 673
EF+ E M + EEMMND
Sbjct: 126 EFQMAQEKMGLTEEMMND 143
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 91.9 bits (218), Expect = 4e-19
Identities = 45/142 (31%), Positives = 85/142 (59%)
Frame = +2
Query: 248 LFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMA 427
LFG K P E +R+ QR + + MR LDR+ ++++E+KV +IK+ AK+G D I+A
Sbjct: 3 LFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLILA 62
Query: 428 KDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQ 607
K ++++R+ + K + KA I +V + +Q + MA +++ T M +M + + +P+I
Sbjct: 63 KSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPEIM 122
Query: 608 KILQEFEKQSEIMDMKEEMMND 673
K ++E + + + EEM+ +
Sbjct: 123 KTMREMSAEMMKLGIIEEMIEE 144
>AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical
protein F23C8.6 protein.
Length = 205
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/129 (24%), Positives = 69/129 (53%)
Frame = +2
Query: 281 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVR 460
L K+ L A + L++ + E+ EK + K+G + ++ A++ +R +
Sbjct: 10 LEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAV 69
Query: 461 KFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSE 640
++ M A I AV+ ++QT +Q + +M GV +AM + + +N+ ++Q+++ FE+ E
Sbjct: 70 NYIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFE 129
Query: 641 IMDMKEEMM 667
+D+ + M
Sbjct: 130 DLDVTTKTM 138
>Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical
protein T24B8.2 protein.
Length = 411
Score = 35.1 bits (77), Expect = 0.046
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 302 LNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKA 481
+ KAM LDRE ++EQ+ KK + + G + + R + + +
Sbjct: 221 IRKAMNKLDREIQQLEQKVKKYDEQCRACLRTGDKGRAQNFLRQRKRAEKDIADKDVQYQ 280
Query: 482 NIQAVSLKIQTLKSQSTMAQAMKGVTRAM-ATMNRQLNMPQIQKILQEFEKQSEIMDMKE 658
+ + +I + K+ + QA K T A AT+ RQ P KI + + MD +
Sbjct: 281 KLLTMLHQISSAKNNKDVLQAYKSGTAAFKATLARQGLSP--DKIHETMDDVVNSMDEYK 338
Query: 659 EM 664
E+
Sbjct: 339 EI 340
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/119 (20%), Positives = 55/119 (46%)
Frame = +2
Query: 317 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 496
+ LDRE+ + ++ ++ + I KLA G D + + D+ +R + + +N +A
Sbjct: 23 KQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKI-ASNAEAA 81
Query: 497 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDMKEEMMND 673
LK + K+++ + ++K M +++ Q Q ++ QS ++ + D
Sbjct: 82 RLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTD 140
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/119 (20%), Positives = 55/119 (46%)
Frame = +2
Query: 317 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 496
+ LDRE+ + ++ ++ + I KLA G D + + D+ +R + + +N +A
Sbjct: 23 KQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKI-ASNAEAA 81
Query: 497 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDMKEEMMND 673
LK + K+++ + ++K M +++ Q Q ++ QS ++ + D
Sbjct: 82 RLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTD 140
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 143 RLVMVNHHSK*IVEYLSVRLHSNCKKHTL*VM-MEWLFGHKMTPDEMLRKNQRALNKAMR 319
R V +N K +VE L NC+ L + +E K L+ R ++ +
Sbjct: 948 RAVEINKQKK-LVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENIS 1006
Query: 320 DLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 430
L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 1007 KLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 143 RLVMVNHHSK*IVEYLSVRLHSNCKKHTL*VM-MEWLFGHKMTPDEMLRKNQRALNKAMR 319
R V +N K +VE L NC+ L + +E K L+ R ++ +
Sbjct: 948 RAVEINKQKK-LVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENIS 1006
Query: 320 DLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 430
L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 1007 KLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 263 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 376
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 143 RLVMVNHHSK*IVEYLSVRLHSNCKKHTL*VM-MEWLFGHKMTPDEMLRKNQRALNKAMR 319
R V +N K +VE L NC+ L + +E K L+ R ++ +
Sbjct: 948 RAVEINKQKK-LVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENIS 1006
Query: 320 DLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 430
L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 1007 KLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 263 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 376
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 603 ICGMFSCLFIVAMARVTPFIACAMVL*DLRVCIFSDTAWMF-AFINMNLRTYRLVRTKSF 427
+CG FS ++++ +A I C+++ ++ AW+F A N + + TK+
Sbjct: 242 VCGSFSIMYMIPVAVWWGTIMCSLI-------VYLSFAWLFGATCNFAMFAAAAIFTKAI 294
Query: 426 AMILTASIC 400
A ++ +C
Sbjct: 295 ATVIQGIVC 303
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 263 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 376
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 263 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 376
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/129 (19%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +2
Query: 281 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYV- 457
+RK LN A D++ MK+E KK + + + + + K +AK + ++R++
Sbjct: 11 IRKQLENLNNATDDINSYEMKLE-TVKKQFCETQLMFNKEMLGIPKKLAKHISKSRQFFD 69
Query: 458 --RKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEK 631
+ ++ +Q + + + K+ MA+ + N++L+ ++ + E+
Sbjct: 70 LKSRESEIRRCVQQAAAQFERQKTSVEMAREQVQILHNSLNNNQELDAE--KQYVDVIEQ 127
Query: 632 QSEIMDMKE 658
Q E++ E
Sbjct: 128 QLELVKEAE 136
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +2
Query: 260 KMTPDEMLR-----KNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE--GQMDAVK 418
K T DEM+ KN++++ + ++ ++ E EK+ + ++KK KE ++ A K
Sbjct: 452 KYTRDEMMAMRSDTKNEQSVEEISAKIENLSVETETDEKENVVEVKKTFKERLAELKAAK 511
Query: 419 IMAK 430
AK
Sbjct: 512 AAAK 515
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +2
Query: 260 KMTPDEMLR-----KNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE--GQMDAVK 418
K T DEM+ KN++++ + ++ ++ E EK+ + ++KK KE ++ A K
Sbjct: 452 KYTRDEMMAMRSDTKNEQSVEEISAKIENLSVETETDEKENVVEVKKTFKERLAELKAAK 511
Query: 419 IMAK 430
AK
Sbjct: 512 AAAK 515
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/134 (18%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = +2
Query: 257 HKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAK--EGQMDAVKIMAK 430
H++ + M +N+ L KA + ++ R K+E+ EKK+I + L + E Q +++ K
Sbjct: 405 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEKVEEQAKLLEVNNK 462
Query: 431 DLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLN--MPQI 604
+L +++ ++ L + ++K++ + S++ + ++ + ++ +L ++
Sbjct: 463 ELEQSK--FQEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAEL 520
Query: 605 QKILQEFEKQSEIM 646
+ + ++ ++Q E M
Sbjct: 521 KDLEEDHQRQVEAM 534
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/134 (18%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = +2
Query: 257 HKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAK--EGQMDAVKIMAK 430
H++ + M +N+ L KA + ++ R K+E+ EKK+I + L + E Q +++ K
Sbjct: 407 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEKVEEQAKLLEVNNK 464
Query: 431 DLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLN--MPQI 604
+L +++ ++ L + ++K++ + S++ + ++ + ++ +L ++
Sbjct: 465 ELEQSK--FQEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAEL 522
Query: 605 QKILQEFEKQSEIM 646
+ + ++ ++Q E M
Sbjct: 523 KDLEEDHQRQVEAM 536
>Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical
protein F57B7.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 578 NRQLNMPQIQKILQEFEKQSEIMDMKEEMMN 670
N Q ++P Q+++QE+EK+++ D + N
Sbjct: 174 NEQSHLPTGQEVIQEWEKEAQFFDFDKPRWN 204
>Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical
protein F17A2.9 protein.
Length = 316
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = -3
Query: 606 CICGMFSCLFIVAMAR--------VTPFIACAMVL*DLRVCIFSDTAWMFAFINMNLRTY 451
CIC +F+C F+V+ + + P + L D + ++S T + +RT+
Sbjct: 245 CICPIFACYFVVSRTKTDLPFEQHILPVLVMLPTLFDPYIILYSVTPY-----RKQIRTW 299
Query: 450 RLVRTKSFAMILTASI 403
L TK+ M++ AS+
Sbjct: 300 -LGMTKTVPMVIVASV 314
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +2
Query: 284 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 454
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 455 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIQKI-LQEF 625
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 626 -EKQSEIMDMKEEMMND 673
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +2
Query: 284 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 454
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 455 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIQKI-LQEF 625
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 626 -EKQSEIMDMKEEMMND 673
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +2
Query: 284 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 454
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 455 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIQKI-LQEF 625
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 626 -EKQSEIMDMKEEMMND 673
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +2
Query: 284 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 454
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 455 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIQKI-LQEF 625
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 626 -EKQSEIMDMKEEMMND 673
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical
protein F56D2.3 protein.
Length = 412
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/51 (21%), Positives = 30/51 (58%)
Frame = +2
Query: 278 MLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 430
+++ N+ ++ + +L ++ K+E++ KK++ + K ++ Q K+M K
Sbjct: 287 IMKNNKMTVSSPVPELSKQAKKLEKEAKKIMENKKMSVEKKQEKLDKLMLK 337
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = +2
Query: 275 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 397
EML++ +++L + + E +MEQ++KK++ +++ L K+
Sbjct: 177 EMLKEQRKSLGERVE----EEKRMEQEQKKMLEELEMLLKK 213
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 272 DEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 397
D+ QRA+ + +DRE+ + E+ E K + + AKE
Sbjct: 302 DKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEEADRKAKE 343
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.9 bits (59), Expect = 7.0
Identities = 24/122 (19%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Frame = +2
Query: 314 MRDLDRERMKMEQQEKKVIADIKKLAKEGQM------DAVKIMAKDLVRTRRYVRKFMLM 475
+ L++ ++ + +EK+ + +KK+ +E QM + ++++ K + K +
Sbjct: 995 LTSLEQTQITLTPEEKQELQILKKIVEEIQMWQEETIEIIQLVDKTPKTVQESETKIKKV 1054
Query: 476 KANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDMK 655
Q V + + L+ S + TM +Q + Q+ K L E I+ K
Sbjct: 1055 NEIQQTVVAQTRRLEDASRFRKDETFTKTVQETMTKQQQVQQLVKELHERAASQNIVVRK 1114
Query: 656 EE 661
+E
Sbjct: 1115 QE 1116
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 254 GHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKD 433
G ++ P ML +A + M +ER+K E +E K + KK+ KEGQ D K M+
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ-DIKKFMSPA 1325
Query: 434 LVRTRR 451
+T +
Sbjct: 1326 APKTAK 1331
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 254 GHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKD 433
G ++ P ML +A + M +ER+K E +E K + KK+ KEGQ D K M+
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ-DIKKFMSPA 1325
Query: 434 LVRTRR 451
+T +
Sbjct: 1326 APKTAK 1331
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Frame = +2
Query: 308 KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVK-IMAKDLVRTRRYVRKFMLMKAN 484
K + D ++EQ+ KK I D+K G + A K I D V ++ +
Sbjct: 275 KLQKQQDEHEKRVEQEHKKEIEDLK-----GALAAEKRISEADKVELKK-------LTEE 322
Query: 485 IQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFE-KQSEIMDMK 655
+Q++ LK + LK+ T + A Q+ ++Q+ L+E E K+ E+++ +
Sbjct: 323 LQSMHLKNKELKNNVTTENS----RATGAVQEAQVLQEKLQQALKELEGKKKELLEQE 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,901
Number of Sequences: 27780
Number of extensions: 270353
Number of successful extensions: 840
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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