Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1663
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   3.9  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 490 IKYNHNSVQTYNSN*L*SNFDY 425
           ++Y +++ Q YNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 490 IKYNHNSVQTYNSN*L*SNFDY 425
           ++Y +++ Q YNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 324 FLWFVSIYV*NSVYIIYMKVCE 389
           F  +V +Y+  +V++ Y+ +CE
Sbjct: 139 FFVYVILYILATVFLAYVWICE 160


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 324 FLWFVSIYV*NSVYIIYMKVCE 389
           F  +V +Y+  +V++ Y+ +CE
Sbjct: 139 FFVYVILYILATVFLAYVWICE 160


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 490 IKYNHNSVQTYNSN*L*SNFDY 425
           ++Y +++ Q YNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 490 IKYNHNSVQTYNSN*L*SNFDY 425
           ++Y +++ Q YNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,417
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)