Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1660
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL834401-1|CAD39063.1|  694|Homo sapiens hypothetical protein pr...    30   9.0  
AL161656-8|CAI12122.1|  274|Homo sapiens vacuolar protein sortin...    30   9.0  
AL161656-7|CAI12121.1|  227|Homo sapiens vacuolar protein sortin...    30   9.0  
AL161656-6|CAI12120.1|  695|Homo sapiens vacuolar protein sortin...    30   9.0  
AL161656-5|CAC21465.1|  839|Homo sapiens vacuolar protein sortin...    30   9.0  
AK055787-1|BAB71013.1|  695|Homo sapiens protein ( Homo sapiens ...    30   9.0  
AF308801-1|AAG34678.1|  839|Homo sapiens vacuolar protein sortin...    30   9.0  

>AL834401-1|CAD39063.1|  694|Homo sapiens hypothetical protein
           protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 60  AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 119

Query: 241 PTQ 249
           P Q
Sbjct: 120 PKQ 122


>AL161656-8|CAI12122.1|  274|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 274

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 87  AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 146

Query: 241 PTQ 249
           P Q
Sbjct: 147 PKQ 149


>AL161656-7|CAI12121.1|  227|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 227

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 87  AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 146

Query: 241 PTQ 249
           P Q
Sbjct: 147 PKQ 149


>AL161656-6|CAI12120.1|  695|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 695

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 205 AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 264

Query: 241 PTQ 249
           P Q
Sbjct: 265 PKQ 267


>AL161656-5|CAC21465.1|  839|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 839

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 205 AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 264

Query: 241 PTQ 249
           P Q
Sbjct: 265 PKQ 267


>AK055787-1|BAB71013.1|  695|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31225 fis, clone KIDNE2004344, weakly similar to
           Vacuolar protein sorting-associated protein. ).
          Length = 695

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 205 AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 264

Query: 241 PTQ 249
           P Q
Sbjct: 265 PKQ 267


>AF308801-1|AAG34678.1|  839|Homo sapiens vacuolar protein sorting
           protein 16 protein.
          Length = 839

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 76  SGCAPHTQPGLSPSSQYVLQTYCADTHRFMYLGMTTHMIRMGRATVLQ-----SCSILII 240
           + C+  T PGL+P     LQ   + T+R + L   T  I MG A++ +     +C+I   
Sbjct: 205 AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAP 264

Query: 241 PTQ 249
           P Q
Sbjct: 265 PKQ 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,122,029
Number of Sequences: 237096
Number of extensions: 2314666
Number of successful extensions: 4789
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4789
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)